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  5. Mp1g25020.1

Mp1g25020.1


Description : transcription factor (TFIIIa). C2H2 zinc finger transcription factor


Gene families : OG0004841 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0004841_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Mp1g25020.1
Cluster HCCA: Cluster_10

Target Alias Description ECC score Gene Family Method Actions
Aev_g28929 TFIIIA transcription factor *(TFIIIa) & original description: none 0.02 OrthoFinder output from all 47 species
Pir_g28982 TFIIIA transcription factor *(TFIIIa) & original description: none 0.02 OrthoFinder output from all 47 species
Sam_g27246 No alias transcription factor *(TFIIIa) & original description: none 0.03 OrthoFinder output from all 47 species
Zm00001e029529_P002 TFIIIA, Zm00001e029529 transcription factor (TFIIIa). C2H2 zinc finger... 0.03 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
BP GO:0000723 telomere maintenance IEP HCCA
MF GO:0003676 nucleic acid binding IEP HCCA
MF GO:0003677 DNA binding IEP HCCA
MF GO:0003899 DNA-directed 5'-3' RNA polymerase activity IEP HCCA
BP GO:0006139 nucleobase-containing compound metabolic process IEP HCCA
BP GO:0006259 DNA metabolic process IEP HCCA
BP GO:0006351 DNA-templated transcription IEP HCCA
BP GO:0006725 cellular aromatic compound metabolic process IEP HCCA
BP GO:0006996 organelle organization IEP HCCA
MF GO:0016779 nucleotidyltransferase activity IEP HCCA
MF GO:0016810 hydrolase activity, acting on carbon-nitrogen (but not peptide) bonds IEP HCCA
MF GO:0019239 deaminase activity IEP HCCA
BP GO:0032200 telomere organization IEP HCCA
BP GO:0032774 RNA biosynthetic process IEP HCCA
MF GO:0034062 5'-3' RNA polymerase activity IEP HCCA
BP GO:0034641 cellular nitrogen compound metabolic process IEP HCCA
BP GO:0046483 heterocycle metabolic process IEP HCCA
BP GO:0051276 chromosome organization IEP HCCA
BP GO:0090304 nucleic acid metabolic process IEP HCCA
BP GO:0097659 nucleic acid-templated transcription IEP HCCA
MF GO:0097747 RNA polymerase activity IEP HCCA
BP GO:1901360 organic cyclic compound metabolic process IEP HCCA
InterPro domains Description Start Stop
IPR013087 Znf_C2H2_type 261 285
IPR013087 Znf_C2H2_type 130 154
IPR013087 Znf_C2H2_type 101 125
No external refs found!