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  5. Mp1g24800.1

Mp1g24800.1 (AMY1, ATAMY1)


Aliases : AMY1, ATAMY1

Description : alpha amylase


Gene families : OG0000515 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000515_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Mp1g24800.1
Cluster HCCA: Cluster_2

Target Alias Description ECC score Gene Family Method Actions
AT1G69830 AMY3, ATAMY3 alpha-amylase-like 3 0.03 OrthoFinder output from all 47 species
Adi_g020848 AMY1, ATAMY1 alpha amylase & original description: none 0.01 OrthoFinder output from all 47 species
Adi_g020886 AMY2, ATAMY2 alpha amylase & original description: none 0.02 OrthoFinder output from all 47 species
Azfi_s0065.g035819 AMY1, ATAMY1 alpha amylase & original description: CDS=222-1931 0.02 OrthoFinder output from all 47 species
Ceric.17G028300.1 AMY1, ATAMY1,... alpha amylase & original description: pacid=50617601... 0.02 OrthoFinder output from all 47 species
Cre08.g362450 AMY2, ATAMY2 Carbohydrate metabolism.starch... 0.01 OrthoFinder output from all 47 species
Dcu_g12959 AMY1, ATAMY1 alpha amylase & original description: none 0.01 OrthoFinder output from all 47 species
Dcu_g16674 AMY3, ATAMY3 alpha amylase & original description: none 0.03 OrthoFinder output from all 47 species
Dde_g06797 AMY1, ATAMY1 alpha amylase & original description: none 0.02 OrthoFinder output from all 47 species
Dde_g11602 AMY3, ATAMY3 alpha amylase & original description: none 0.02 OrthoFinder output from all 47 species
Gb_04801 AMY2, ATAMY2 alpha amylase 0.02 OrthoFinder output from all 47 species
Gb_20158 No alias Alpha-amylase isozyme 3B OS=Oryza sativa subsp. japonica... 0.02 OrthoFinder output from all 47 species
LOC_Os01g51754.1 AMY3, ATAMY3,... alpha amylase 0.02 OrthoFinder output from all 47 species
Len_g16715 AMY1, ATAMY1 alpha amylase & original description: none 0.02 OrthoFinder output from all 47 species
Lfl_g01682 AMY1, ATAMY1 alpha amylase & original description: none 0.02 OrthoFinder output from all 47 species
MA_30833g0010 AMY1, ATAMY1 alpha amylase 0.01 OrthoFinder output from all 47 species
MA_336273g0010 AMY1, ATAMY1 alpha amylase 0.01 OrthoFinder output from all 47 species
Ore_g07501 AMY3, ATAMY3 alpha amylase & original description: none 0.02 OrthoFinder output from all 47 species
Smo97625 AMY1, ATAMY1 Carbohydrate metabolism.starch... 0.05 OrthoFinder output from all 47 species
Solyc04g082090.3.1 AMY2, ATAMY2,... alpha amylase 0.01 OrthoFinder output from all 47 species
Spa_g37719 AMY1, ATAMY1 alpha amylase & original description: none 0.02 OrthoFinder output from all 47 species
Tin_g05235 AMY3, ATAMY3 alpha amylase & original description: none 0.02 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
MF GO:0003824 catalytic activity IEA Interproscan
MF GO:0004556 alpha-amylase activity IEA Interproscan
MF GO:0005509 calcium ion binding IEA Interproscan
BP GO:0005975 carbohydrate metabolic process IEA Interproscan
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Type GO Term Name Evidence Source
CC GO:0005741 mitochondrial outer membrane IEP HCCA
BP GO:0006869 lipid transport IEP HCCA
MF GO:0008289 lipid binding IEP HCCA
CC GO:0019867 outer membrane IEP HCCA
CC GO:0031090 organelle membrane IEP HCCA
CC GO:0031966 mitochondrial membrane IEP HCCA
CC GO:0031968 organelle outer membrane IEP HCCA
CC GO:0098588 bounding membrane of organelle IEP HCCA
InterPro domains Description Start Stop
IPR006047 Glyco_hydro_13_cat_dom 128 423
IPR012850 A-amylase_bs_C 444 504
No external refs found!