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Aliases : PTAC12, HMR
Description : PAP5/TAC12 cofactor of plastid-encoded RNA polymerase. transcriptional coactivator (HEMERA)
Gene families : OG0007916 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0007916_tree
Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.
| Target | Alias | Description | ECC score | Gene Family Method | Actions |
|---|---|---|---|---|---|
| AMTR_s00092p00069380 | PTAC12, HMR,... | RNA biosynthesis.organelle machineries.RNA polymerase... | 0.02 | OrthoFinder output from all 47 species | |
| AT2G34640 | PTAC12, HMR | plastid transcriptionally active 12 | 0.11 | OrthoFinder output from all 47 species | |
| Aev_g02450 | PTAC12, HMR | transcriptional coactivator *(HEMERA) & original... | 0.02 | OrthoFinder output from all 47 species | |
| Als_g04370 | PTAC12, HMR | transcriptional coactivator *(HEMERA) & original... | 0.03 | OrthoFinder output from all 47 species | |
| Aob_g13152 | PTAC12, HMR | transcriptional coactivator *(HEMERA) & original... | 0.02 | OrthoFinder output from all 47 species | |
| Azfi_s0068.g036416 | PTAC12, HMR | transcriptional coactivator *(HEMERA) & original... | 0.07 | OrthoFinder output from all 47 species | |
| Ceric.13G090100.1 | PTAC12, HMR,... | transcriptional coactivator *(HEMERA) & original... | 0.11 | OrthoFinder output from all 47 species | |
| Dcu_g32331 | PTAC12, HMR | transcriptional coactivator *(HEMERA) & original... | 0.06 | OrthoFinder output from all 47 species | |
| GSVIVT01021555001 | PTAC12, HMR | RNA biosynthesis.organelle machineries.RNA polymerase... | 0.07 | OrthoFinder output from all 47 species | |
| Gb_08037 | PTAC12, HMR | PAP5/TAC12 cofactor of plastid-encoded RNA polymerase.... | 0.08 | OrthoFinder output from all 47 species | |
| LOC_Os01g56350.3 | PTAC12, HMR,... | PAP5/TAC12 cofactor of plastid-encoded RNA polymerase.... | 0.14 | OrthoFinder output from all 47 species | |
| Lfl_g05496 | PTAC12, HMR | transcriptional coactivator *(HEMERA) & original... | 0.06 | OrthoFinder output from all 47 species | |
| MA_8815984g0010 | PTAC12, HMR | PAP5/TAC12 cofactor of plastid-encoded RNA polymerase.... | 0.04 | OrthoFinder output from all 47 species | |
| Nbi_g13784 | PTAC12, HMR | transcriptional coactivator *(HEMERA) & original... | 0.03 | OrthoFinder output from all 47 species | |
| Ore_g03883 | PTAC12, HMR | transcriptional coactivator *(HEMERA) & original... | 0.03 | OrthoFinder output from all 47 species | |
| Sacu_v1.1_s0102.g019917 | PTAC12, HMR | transcriptional coactivator *(HEMERA) & original... | 0.03 | OrthoFinder output from all 47 species | |
| Sam_g49988 | No alias | transcriptional coactivator *(HEMERA) & original... | 0.02 | OrthoFinder output from all 47 species | |
| Solyc02g070390.3.1 | PTAC12, HMR,... | PAP5/TAC12 cofactor of plastid-encoded RNA polymerase.... | 0.07 | OrthoFinder output from all 47 species | |
| Tin_g27291 | PTAC12, HMR | transcriptional coactivator *(HEMERA) & original... | 0.02 | OrthoFinder output from all 47 species | |
| Zm00001e019697_P001 | PTAC12, HMR,... | PAP5/TAC12 cofactor of plastid-encoded RNA polymerase.... | 0.11 | OrthoFinder output from all 47 species |
| Type | GO Term | Name | Evidence | Source |
|---|---|---|---|---|
No GO annotation available for this sequence |
| Type | GO Term | Name | Evidence | Source |
|---|---|---|---|---|
| MF | GO:0000166 | nucleotide binding | IEP | HCCA |
| MF | GO:0003674 | molecular_function | IEP | HCCA |
| MF | GO:0004175 | endopeptidase activity | IEP | HCCA |
| MF | GO:0004222 | metalloendopeptidase activity | IEP | HCCA |
| MF | GO:0005488 | binding | IEP | HCCA |
| MF | GO:0005524 | ATP binding | IEP | HCCA |
| MF | GO:0005525 | GTP binding | IEP | HCCA |
| BP | GO:0006355 | regulation of DNA-templated transcription | IEP | HCCA |
| BP | GO:0006364 | rRNA processing | IEP | HCCA |
| BP | GO:0006396 | RNA processing | IEP | HCCA |
| BP | GO:0006400 | tRNA modification | IEP | HCCA |
| BP | GO:0006508 | proteolysis | IEP | HCCA |
| BP | GO:0006807 | nitrogen compound metabolic process | IEP | HCCA |
| BP | GO:0008033 | tRNA processing | IEP | HCCA |
| BP | GO:0008150 | biological_process | IEP | HCCA |
| BP | GO:0008152 | metabolic process | IEP | HCCA |
| MF | GO:0008173 | RNA methyltransferase activity | IEP | HCCA |
| MF | GO:0008175 | tRNA methyltransferase activity | IEP | HCCA |
| MF | GO:0008176 | tRNA (guanine-N7-)-methyltransferase activity | IEP | HCCA |
| MF | GO:0008233 | peptidase activity | IEP | HCCA |
| MF | GO:0008237 | metallopeptidase activity | IEP | HCCA |
| MF | GO:0008757 | S-adenosylmethionine-dependent methyltransferase activity | IEP | HCCA |
| BP | GO:0009889 | regulation of biosynthetic process | IEP | HCCA |
| BP | GO:0010468 | regulation of gene expression | IEP | HCCA |
| BP | GO:0010556 | regulation of macromolecule biosynthetic process | IEP | HCCA |
| BP | GO:0016072 | rRNA metabolic process | IEP | HCCA |
| MF | GO:0016423 | tRNA (guanine) methyltransferase activity | IEP | HCCA |
| MF | GO:0016787 | hydrolase activity | IEP | HCCA |
| MF | GO:0017076 | purine nucleotide binding | IEP | HCCA |
| MF | GO:0019001 | guanyl nucleotide binding | IEP | HCCA |
| BP | GO:0019219 | regulation of nucleobase-containing compound metabolic process | IEP | HCCA |
| BP | GO:0019222 | regulation of metabolic process | IEP | HCCA |
| BP | GO:0019538 | protein metabolic process | IEP | HCCA |
| MF | GO:0030554 | adenyl nucleotide binding | IEP | HCCA |
| BP | GO:0031323 | regulation of cellular metabolic process | IEP | HCCA |
| BP | GO:0031326 | regulation of cellular biosynthetic process | IEP | HCCA |
| MF | GO:0032553 | ribonucleotide binding | IEP | HCCA |
| MF | GO:0032555 | purine ribonucleotide binding | IEP | HCCA |
| MF | GO:0032559 | adenyl ribonucleotide binding | IEP | HCCA |
| MF | GO:0032561 | guanyl ribonucleotide binding | IEP | HCCA |
| BP | GO:0034470 | ncRNA processing | IEP | HCCA |
| BP | GO:0034660 | ncRNA metabolic process | IEP | HCCA |
| MF | GO:0035639 | purine ribonucleoside triphosphate binding | IEP | HCCA |
| MF | GO:0036094 | small molecule binding | IEP | HCCA |
| MF | GO:0043167 | ion binding | IEP | HCCA |
| MF | GO:0043168 | anion binding | IEP | HCCA |
| BP | GO:0043170 | macromolecule metabolic process | IEP | HCCA |
| BP | GO:0044238 | primary metabolic process | IEP | HCCA |
| BP | GO:0050794 | regulation of cellular process | IEP | HCCA |
| BP | GO:0051171 | regulation of nitrogen compound metabolic process | IEP | HCCA |
| BP | GO:0051252 | regulation of RNA metabolic process | IEP | HCCA |
| BP | GO:0060255 | regulation of macromolecule metabolic process | IEP | HCCA |
| MF | GO:0070569 | uridylyltransferase activity | IEP | HCCA |
| BP | GO:0071704 | organic substance metabolic process | IEP | HCCA |
| MF | GO:0071949 | FAD binding | IEP | HCCA |
| BP | GO:0080090 | regulation of primary metabolic process | IEP | HCCA |
| MF | GO:0097159 | organic cyclic compound binding | IEP | HCCA |
| MF | GO:0097367 | carbohydrate derivative binding | IEP | HCCA |
| MF | GO:0140096 | catalytic activity, acting on a protein | IEP | HCCA |
| MF | GO:1901265 | nucleoside phosphate binding | IEP | HCCA |
| MF | GO:1901363 | heterocyclic compound binding | IEP | HCCA |
| BP | GO:1903506 | regulation of nucleic acid-templated transcription | IEP | HCCA |
| BP | GO:2001141 | regulation of RNA biosynthetic process | IEP | HCCA |
No InterPro domains available for this sequence
| No external refs found! |