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  5. Mp1g23190.1

Mp1g23190.1 (AGO9)


Aliases : AGO9

Description : siRNA-integrating factor (AGO)


Gene families : OG0000157 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000157_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Mp1g23190.1
Cluster HCCA: Cluster_15

Target Alias Description ECC score Gene Family Method Actions
Adi_g114845 AGO1 not classified & original description: none 0.02 OrthoFinder output from all 47 species
Aop_g29550 AGO1 not classified & original description: none 0.02 OrthoFinder output from all 47 species
Aspi01Gene29016.t1 AGO4, OCP11,... siRNA-integrating factor *(AGO) & original description: none 0.03 OrthoFinder output from all 47 species
Cba_g77990 AGO1 regulatory protein *(AGO7) of transacting siRNA pathway... 0.01 OrthoFinder output from all 47 species
Dcu_g16554 AGO1 miRNA recruiting factor (AGO) of RNA-induced silencing... 0.03 OrthoFinder output from all 47 species
Dcu_g18764 AGO1 regulatory protein *(AGO7) of transacting siRNA pathway... 0.02 OrthoFinder output from all 47 species
Dde_g37805 AGO1 regulatory protein *(AGO7) of transacting siRNA pathway... 0.01 OrthoFinder output from all 47 species
GSVIVT01012529001 AGO7, ZIP Protein argonaute 7 OS=Oryza sativa subsp. japonica 0.02 OrthoFinder output from all 47 species
Gb_34718 PNH, AGO10, ZLL Protein argonaute 10 OS=Arabidopsis thaliana... 0.04 OrthoFinder output from all 47 species
LOC_Os02g07310.1 AGO1, LOC_Os02g07310 Protein argonaute 17 OS=Oryza sativa subsp. japonica... 0.02 OrthoFinder output from all 47 species
LOC_Os04g06770.2 AGO4, OCP11,... siRNA-integrating factor (AGO) 0.02 OrthoFinder output from all 47 species
LOC_Os04g52540.1 AGO2, LOC_Os04g52540 siRNA-binding factor (AGO2) of non-canonical RdDM pathway 0.03 OrthoFinder output from all 47 species
Lfl_g06710 AGO1 regulatory protein *(AGO7) of transacting siRNA pathway... 0.02 OrthoFinder output from all 47 species
MA_118377g0010 AGO1 RIS-Complex miRNA recruiting factor (AGO1) 0.03 OrthoFinder output from all 47 species
MA_71066g0010 AGO4, OCP11 Protein argonaute 4B OS=Oryza sativa subsp. japonica... 0.01 OrthoFinder output from all 47 species
Nbi_g07722 AGO1 regulatory protein *(AGO7) of transacting siRNA pathway... 0.02 OrthoFinder output from all 47 species
Ore_g20845 PNH, AGO10, ZLL not classified & original description: none 0.02 OrthoFinder output from all 47 species
Solyc01g008960.3.1 AGO4, OCP11,... siRNA-integrating factor (AGO) 0.02 OrthoFinder output from all 47 species
Solyc06g073540.4.1 AGO4, OCP11,... siRNA-integrating factor (AGO) 0.02 OrthoFinder output from all 47 species
Solyc07g049500.3.1 AGO6, Solyc07g049500 siRNA-integrating factor (AGO) 0.04 OrthoFinder output from all 47 species
Zm00001e004997_P001 PNH, AGO10, ZLL,... Protein argonaute 18 OS=Oryza sativa subsp. japonica... 0.02 OrthoFinder output from all 47 species
Zm00001e027670_P001 AGO1, Zm00001e027670 RIS-Complex miRNA recruiting factor (AGO1) 0.03 OrthoFinder output from all 47 species
Zm00001e032609_P001 AGO4, OCP11,... siRNA-integrating factor (AGO) 0.04 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
MF GO:0003676 nucleic acid binding IEA Interproscan
MF GO:0005515 protein binding IEA Interproscan
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Type GO Term Name Evidence Source
BP GO:0000723 telomere maintenance IEP HCCA
MF GO:0004518 nuclease activity IEP HCCA
MF GO:0004519 endonuclease activity IEP HCCA
CC GO:0005634 nucleus IEP HCCA
BP GO:0006139 nucleobase-containing compound metabolic process IEP HCCA
BP GO:0006259 DNA metabolic process IEP HCCA
BP GO:0006281 DNA repair IEP HCCA
BP GO:0006302 double-strand break repair IEP HCCA
BP GO:0006396 RNA processing IEP HCCA
BP GO:0006397 mRNA processing IEP HCCA
BP GO:0006725 cellular aromatic compound metabolic process IEP HCCA
BP GO:0006807 nitrogen compound metabolic process IEP HCCA
BP GO:0006974 cellular response to DNA damage stimulus IEP HCCA
BP GO:0006996 organelle organization IEP HCCA
MF GO:0008173 RNA methyltransferase activity IEP HCCA
BP GO:0016070 RNA metabolic process IEP HCCA
BP GO:0016071 mRNA metabolic process IEP HCCA
CC GO:0018995 host cellular component IEP HCCA
MF GO:0030145 manganese ion binding IEP HCCA
BP GO:0031123 RNA 3'-end processing IEP HCCA
BP GO:0031124 mRNA 3'-end processing IEP HCCA
BP GO:0032200 telomere organization IEP HCCA
BP GO:0033554 cellular response to stress IEP HCCA
CC GO:0033643 host cell part IEP HCCA
CC GO:0033646 host intracellular part IEP HCCA
CC GO:0033647 host intracellular organelle IEP HCCA
CC GO:0033648 host intracellular membrane-bounded organelle IEP HCCA
BP GO:0034641 cellular nitrogen compound metabolic process IEP HCCA
CC GO:0042025 host cell nucleus IEP HCCA
BP GO:0043170 macromolecule metabolic process IEP HCCA
CC GO:0043226 organelle IEP HCCA
CC GO:0043227 membrane-bounded organelle IEP HCCA
CC GO:0043229 intracellular organelle IEP HCCA
CC GO:0043231 intracellular membrane-bounded organelle IEP HCCA
BP GO:0044237 cellular metabolic process IEP HCCA
BP GO:0044238 primary metabolic process IEP HCCA
BP GO:0044260 cellular macromolecule metabolic process IEP HCCA
BP GO:0046483 heterocycle metabolic process IEP HCCA
BP GO:0051276 chromosome organization IEP HCCA
BP GO:0051716 cellular response to stimulus IEP HCCA
BP GO:0071704 organic substance metabolic process IEP HCCA
BP GO:0090304 nucleic acid metabolic process IEP HCCA
CC GO:0110165 cellular anatomical entity IEP HCCA
BP GO:1901360 organic cyclic compound metabolic process IEP HCCA
InterPro domains Description Start Stop
IPR003165 Piwi 596 907
IPR003100 PAZ_dom 322 446
IPR032472 ArgoL2 457 502
IPR032474 Argonaute_N 96 251
IPR014811 ArgoL1 264 312
No external refs found!