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Aliases : SE
Description : C2H2 zinc finger transcription factor. component SERRATE of DCL1-HYL1 miRNA biogenesis complex
Gene families : OG0003096 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0003096_tree
Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.
| Target | Alias | Description | ECC score | Gene Family Method | Actions |
|---|---|---|---|---|---|
| Adi_g061118 | SE | component *(SERRATE) of DCL1-HYL1 miRNA biogenesis... | 0.02 | OrthoFinder output from all 47 species | |
| Adi_g087436 | SE | component *(SERRATE) of DCL1-HYL1 miRNA biogenesis... | 0.01 | OrthoFinder output from all 47 species | |
| Ala_g05956 | SE | component *(SERRATE) of DCL1-HYL1 miRNA biogenesis... | 0.03 | OrthoFinder output from all 47 species | |
| Als_g13237 | SE | component *(SERRATE) of DCL1-HYL1 miRNA biogenesis... | 0.02 | OrthoFinder output from all 47 species | |
| Aob_g02258 | SE | component *(SERRATE) of DCL1-HYL1 miRNA biogenesis... | 0.01 | OrthoFinder output from all 47 species | |
| Aspi01Gene07777.t1 | SE, Aspi01Gene07777 | component *(SERRATE) of DCL1-HYL1 miRNA bioGenesis... | 0.03 | OrthoFinder output from all 47 species | |
| Azfi_s0038.g026225 | SE | component *(SERRATE) of DCL1-HYL1 miRNA biogenesis... | 0.02 | OrthoFinder output from all 47 species | |
| Ceric.03G039000.1 | SE, Ceric.03G039000 | component *(SERRATE) of DCL1-HYL1 miRNA biogenesis... | 0.03 | OrthoFinder output from all 47 species | |
| Dac_g03821 | SE | component *(SERRATE) of DCL1-HYL1 miRNA biogenesis... | 0.02 | OrthoFinder output from all 47 species | |
| Dcu_g14201 | SE | component *(SERRATE) of DCL1-HYL1 miRNA biogenesis... | 0.02 | OrthoFinder output from all 47 species | |
| Dde_g10898 | SE | component *(SERRATE) of DCL1-HYL1 miRNA biogenesis... | 0.02 | OrthoFinder output from all 47 species | |
| Ehy_g08633 | SE | component *(SERRATE) of DCL1-HYL1 miRNA biogenesis... | 0.03 | OrthoFinder output from all 47 species | |
| GSVIVT01027348001 | SE | RNA biosynthesis.transcriptional activation.C2H2 zinc... | 0.03 | OrthoFinder output from all 47 species | |
| GSVIVT01037454001 | SE | RNA biosynthesis.transcriptional activation.C2H2 zinc... | 0.04 | OrthoFinder output from all 47 species | |
| LOC_Os06g48530.1 | SE, LOC_Os06g48530 | C2H2 zinc finger transcription factor. component SERRATE... | 0.04 | OrthoFinder output from all 47 species | |
| LOC_Os08g40560.1 | SE, LOC_Os08g40560 | C2H2 zinc finger transcription factor. component SERRATE... | 0.03 | OrthoFinder output from all 47 species | |
| Len_g10116 | SE | component *(SERRATE) of DCL1-HYL1 miRNA biogenesis... | 0.06 | OrthoFinder output from all 47 species | |
| Lfl_g02072 | SE | component *(SERRATE) of DCL1-HYL1 miRNA biogenesis... | 0.05 | OrthoFinder output from all 47 species | |
| MA_10426519g0010 | SE | C2H2 zinc finger transcription factor. component SERRATE... | 0.02 | OrthoFinder output from all 47 species | |
| Ore_g06846 | SE | component *(SERRATE) of DCL1-HYL1 miRNA biogenesis... | 0.02 | OrthoFinder output from all 47 species | |
| Ore_g36418 | SE | component *(SERRATE) of DCL1-HYL1 miRNA biogenesis... | 0.02 | OrthoFinder output from all 47 species | |
| Pir_g04707 | SE | component *(SERRATE) of DCL1-HYL1 miRNA biogenesis... | 0.04 | OrthoFinder output from all 47 species | |
| Pnu_g00841 | SE | component *(SERRATE) of DCL1-HYL1 miRNA biogenesis... | 0.03 | OrthoFinder output from all 47 species | |
| Ppi_g62657 | SE | component *(SERRATE) of DCL1-HYL1 miRNA biogenesis... | 0.02 | OrthoFinder output from all 47 species | |
| Sam_g19467 | No alias | component *(SERRATE) of DCL1-HYL1 miRNA biogenesis... | 0.02 | OrthoFinder output from all 47 species | |
| Solyc01g009090.3.1 | SE, Solyc01g009090 | C2H2 zinc finger transcription factor. component SERRATE... | 0.02 | OrthoFinder output from all 47 species | |
| Spa_g54768 | SE | component *(SERRATE) of DCL1-HYL1 miRNA biogenesis... | 0.04 | OrthoFinder output from all 47 species | |
| Tin_g09411 | SE | component *(SERRATE) of DCL1-HYL1 miRNA biogenesis... | 0.02 | OrthoFinder output from all 47 species | |
| Zm00001e003610_P002 | SE, Zm00001e003610 | C2H2 zinc finger transcription factor. component SERRATE... | 0.04 | OrthoFinder output from all 47 species | |
| Zm00001e021924_P001 | SE, Zm00001e021924 | C2H2 zinc finger transcription factor. component SERRATE... | 0.03 | OrthoFinder output from all 47 species |
| Type | GO Term | Name | Evidence | Source |
|---|---|---|---|---|
No GO annotation available for this sequence |
| Type | GO Term | Name | Evidence | Source |
|---|---|---|---|---|
| CC | GO:0000347 | THO complex | IEP | HCCA |
| CC | GO:0000445 | THO complex part of transcription export complex | IEP | HCCA |
| MF | GO:0003676 | nucleic acid binding | IEP | HCCA |
| MF | GO:0005488 | binding | IEP | HCCA |
| BP | GO:0006396 | RNA processing | IEP | HCCA |
| BP | GO:0006397 | mRNA processing | IEP | HCCA |
| BP | GO:0016070 | RNA metabolic process | IEP | HCCA |
| BP | GO:0016071 | mRNA metabolic process | IEP | HCCA |
| BP | GO:0016579 | protein deubiquitination | IEP | HCCA |
| BP | GO:0070646 | protein modification by small protein removal | IEP | HCCA |
| MF | GO:0097159 | organic cyclic compound binding | IEP | HCCA |
| MF | GO:1901363 | heterocyclic compound binding | IEP | HCCA |
| No external refs found! |