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  5. Mp1g22070.1

Mp1g22070.1


Description : ornithine decarboxylase. S-adenosyl methionine decarboxylase


Gene families : OG0000356 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000356_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Mp1g22070.1

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00001p00164800 evm_27.TU.AmTr_v1... Polyamine metabolism.putrescine.synthesis.cytosolic... 0.03 OrthoFinder output from all 47 species
Adi_g068375 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Aev_g16826 No alias EC_4.1 carbon-carbon lyase & original description: none 0.03 OrthoFinder output from all 47 species
Azfi_s0002.g001379 SAMDC EC_4.1 carbon-carbon lyase & original description: CDS=1-2412 0.03 OrthoFinder output from all 47 species
Azfi_s0090.g042654 SAMDC EC_4.1 carbon-carbon lyase & original description: CDS=700-2217 0.03 OrthoFinder output from all 47 species
Cba_g07410 No alias EC_4.1 carbon-carbon lyase & original description: none 0.03 OrthoFinder output from all 47 species
Dac_g10995 No alias EC_4.1 carbon-carbon lyase & original description: none 0.03 OrthoFinder output from all 47 species
Len_g21197 No alias ornithine decarboxylase & original description: none 0.02 OrthoFinder output from all 47 species
MA_123449g0010 No alias S-adenosyl methionine decarboxylase 0.02 OrthoFinder output from all 47 species
Ore_g03826 No alias EC_4.1 carbon-carbon lyase & original description: none 0.02 OrthoFinder output from all 47 species
Ore_g26955 No alias EC_4.1 carbon-carbon lyase & original description: none 0.02 OrthoFinder output from all 47 species
Smo100475 No alias Polyamine... 0.03 OrthoFinder output from all 47 species
Solyc04g082030.1.1 Solyc04g082030 ornithine decarboxylase 0.03 OrthoFinder output from all 47 species
Solyc05g010420.2.1 Solyc05g010420 S-adenosyl methionine decarboxylase 0.03 OrthoFinder output from all 47 species
Zm00001e035959_P001 Zm00001e035959 ornithine decarboxylase 0.02 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
MF GO:0003824 catalytic activity IEA Interproscan
MF GO:0004014 adenosylmethionine decarboxylase activity IEA Interproscan
BP GO:0006597 spermine biosynthetic process IEA Interproscan
BP GO:0008295 spermidine biosynthetic process IEA Interproscan
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Type GO Term Name Evidence Source
MF GO:0016614 oxidoreductase activity, acting on CH-OH group of donors IEP HCCA
MF GO:0016616 oxidoreductase activity, acting on the CH-OH group of donors, NAD or NADP as acceptor IEP HCCA
MF GO:0051287 NAD binding IEP HCCA
InterPro domains Description Start Stop
IPR022644 De-COase2_N 452 688
IPR001985 S-AdoMet_decarboxylase 20 348
IPR022643 De-COase2_C 449 791
No external refs found!