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  5. Mp1g15120.1

Mp1g15120.1


Description : Protein THYLAKOID ASSEMBLY 8-like, chloroplastic OS=Arabidopsis thaliana (sp|q9stf9|tha8l_arath : 111.0)


Gene families : OG0001426 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0001426_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Mp1g15120.1

Target Alias Description ECC score Gene Family Method Actions
Adi_g086836 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Als_g02240 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Aob_g05778 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Dac_g37296 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
GSVIVT01038096001 No alias Protein THYLAKOID ASSEMBLY 8-like, chloroplastic... 0.04 OrthoFinder output from all 47 species
LOC_Os04g39970.1 LOC_Os04g39970 no hits & (original description: none) 0.05 OrthoFinder output from all 47 species
Msp_g07505 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Solyc03g120510.1.1 Solyc03g120510 Protein THYLAKOID ASSEMBLY 8, chloroplastic... 0.02 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
MF GO:0003697 single-stranded DNA binding IEP HCCA
BP GO:0006396 RNA processing IEP HCCA
BP GO:0006397 mRNA processing IEP HCCA
MF GO:0008641 ubiquitin-like modifier activating enzyme activity IEP HCCA
BP GO:0016071 mRNA metabolic process IEP HCCA
MF GO:0016874 ligase activity IEP HCCA
MF GO:0016877 ligase activity, forming carbon-sulfur bonds IEP HCCA
MF GO:0140657 ATP-dependent activity IEP HCCA
InterPro domains Description Start Stop
IPR002885 Pentatricopeptide_repeat 158 186
IPR002885 Pentatricopeptide_repeat 193 221
No external refs found!