Mp1g11520.1

Description : component XRCC4 of LIG4-XRCC4 ligase complex

Gene families : OG0004816 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0004816_tree

Sequence : coding (download), protein (download)

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.

Type	Description	Actions
Neighborhood	HRR: Mp1g11520.1
Cluster	HCCA: Cluster_10

Target	Alias	Description	ECC score	Gene Family Method
Adi_g103746	XRCC4	component *(XRCC4) of LIG4-XRCC4 ligase complex &...	0.02	OrthoFinder output from all 47 species
Dde_g11807	XRCC4	component *(XRCC4) of LIG4-XRCC4 ligase complex &...	0.02	OrthoFinder output from all 47 species
Gb_22879	No alias	DNA repair protein XRCC4 OS=Arabidopsis thaliana...	0.02	OrthoFinder output from all 47 species
Pnu_g18680	XRCC4	component *(XRCC4) of LIG4-XRCC4 ligase complex &...	0.02	OrthoFinder output from all 47 species
Tin_g12937	XRCC4	component *(XRCC4) of LIG4-XRCC4 ligase complex &...	0.02	OrthoFinder output from all 47 species

Type	GO Term	Name	Evidence	Source
MF	GO:0003674	molecular_function	None	Extended
MF	GO:0003676	nucleic acid binding	None	Extended
MF	GO:0003677	DNA binding	IEA	Interproscan
MF	GO:0005488	binding	None	Extended
CC	GO:0005575	cellular_component	None	Extended
CC	GO:0005634	nucleus	IEA	Interproscan
BP	GO:0006139	nucleobase-containing compound metabolic process	None	Extended
BP	GO:0006259	DNA metabolic process	None	Extended
BP	GO:0006281	DNA repair	None	Extended
BP	GO:0006302	double-strand break repair	IEA	Interproscan
BP	GO:0006310	DNA recombination	IEA	Interproscan
BP	GO:0006725	cellular aromatic compound metabolic process	None	Extended
BP	GO:0006807	nitrogen compound metabolic process	None	Extended
BP	GO:0006950	response to stress	None	Extended
BP	GO:0006974	cellular response to DNA damage stimulus	None	Extended
BP	GO:0008150	biological_process	None	Extended
BP	GO:0008152	metabolic process	None	Extended
BP	GO:0009987	cellular process	None	Extended
BP	GO:0033554	cellular response to stress	None	Extended
BP	GO:0034641	cellular nitrogen compound metabolic process	None	Extended
BP	GO:0043170	macromolecule metabolic process	None	Extended
CC	GO:0043226	organelle	None	Extended
CC	GO:0043227	membrane-bounded organelle	None	Extended
CC	GO:0043229	intracellular organelle	None	Extended
CC	GO:0043231	intracellular membrane-bounded organelle	None	Extended
BP	GO:0044237	cellular metabolic process	None	Extended
BP	GO:0044238	primary metabolic process	None	Extended
BP	GO:0044260	cellular macromolecule metabolic process	None	Extended
BP	GO:0046483	heterocycle metabolic process	None	Extended
BP	GO:0050896	response to stimulus	None	Extended
BP	GO:0051716	cellular response to stimulus	None	Extended
BP	GO:0071704	organic substance metabolic process	None	Extended
BP	GO:0090304	nucleic acid metabolic process	None	Extended
MF	GO:0097159	organic cyclic compound binding	None	Extended
CC	GO:0110165	cellular anatomical entity	None	Extended
BP	GO:1901360	organic cyclic compound metabolic process	None	Extended
MF	GO:1901363	heterocyclic compound binding	None	Extended

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Type	GO Term	Name	Evidence	Source
No Predicted GO terms available for this sequence

InterPro domains	Description	Start	Stop
IPR010585	DNA_repair_prot_XRCC4	30	310

External Links

No external refs found!

Mp1g11520.1

Expression Profile

Co-expression Networks

Expression Context Conservation (ECC)

Functional Annotation