Mp1g11040.1 (chr31)

Aliases : chr31

Description : SNF2 domain-containing protein CLASSY 2 OS=Arabidopsis thaliana (sp|f4k493|clsy2_arath : 365.0)

Gene families : OG0001261 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0001261_tree

Sequence : coding (download), protein (download)

Attention: This gene has low abundance.

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.

Type	Description	Actions
Neighborhood	HRR: Mp1g11040.1
Cluster	HCCA: Cluster_10

Target	Alias	Description	ECC score	Gene Family Method
AMTR_s00142p00081110	chr31	RNA biosynthesis.siRNA biogenesis.CLSY3/4 regulator protein	0.03	OrthoFinder output from all 47 species
Aspi01Gene00891.t1	DMS1, DRD1,...	not classified & original description: none	0.03	OrthoFinder output from all 47 species
Azfi_s0355.g066712	CLSY, CHR38	not classified & original description: CDS=1-4428	0.04	OrthoFinder output from all 47 species
Ceric.02G035400.1	DMS1, DRD1,...	not classified & original description: pacid=50586091...	0.02	OrthoFinder output from all 47 species
Dcu_g51294	DMS1, DRD1, CHR35	not classified & original description: none	0.02	OrthoFinder output from all 47 species
Mp4g19670.1	CHR34	Protein CHROMATIN REMODELING 35 OS=Arabidopsis thaliana...	0.04	OrthoFinder output from all 47 species

Type	GO Term	Name	Evidence	Source
MF	GO:0000166	nucleotide binding	None	Extended
MF	GO:0003674	molecular_function	None	Extended
MF	GO:0003682	chromatin binding	IEA	Interproscan
MF	GO:0005488	binding	None	Extended
MF	GO:0005524	ATP binding	IEA	Interproscan
MF	GO:0017076	purine nucleotide binding	None	Extended
MF	GO:0030554	adenyl nucleotide binding	None	Extended
MF	GO:0032553	ribonucleotide binding	None	Extended
MF	GO:0032555	purine ribonucleotide binding	None	Extended
MF	GO:0032559	adenyl ribonucleotide binding	None	Extended
MF	GO:0035639	purine ribonucleoside triphosphate binding	None	Extended
MF	GO:0036094	small molecule binding	None	Extended
MF	GO:0043167	ion binding	None	Extended
MF	GO:0043168	anion binding	None	Extended
MF	GO:0097159	organic cyclic compound binding	None	Extended
MF	GO:0097367	carbohydrate derivative binding	None	Extended
MF	GO:1901265	nucleoside phosphate binding	None	Extended
MF	GO:1901363	heterocyclic compound binding	None	Extended

Type	GO Term	Name	Evidence	Source
No Predicted GO terms available for this sequence

InterPro domains	Description	Start	Stop
IPR032001	SAWADEE_dom	67	168
IPR001650	Helicase_C	1321	1433
IPR000330	SNF2_N	901	1132

External Links

No external refs found!