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  5. Zm00001e042445_P001

Zm00001e042445_P001 (RPL2.1, Zm00001e042445)


Aliases : RPL2.1, Zm00001e042445

Description : 50S ribosomal protein L2, chloroplastic OS=Sorghum bicolor (sp|a1e9w6|rk2_sorbi : 208.0)


Gene families : OG0002194 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0002194_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Zm00001e042445_P001
Cluster HCCA: Cluster_140

Target Alias Description ECC score Gene Family Method Actions
Aev_g14432 RPL2.1 component *(uL2c) of large plastid ribosomal-subunit... 0.03 OrthoFinder output from all 47 species
Ceric.05G042700.1 RPL2.1, Ceric.05G042700 not classified & original description: pacid=50577724... 0.02 OrthoFinder output from all 47 species
Ceric.05G048500.1 RPL2.1, Ceric.05G048500 component *(uL2c) of large plastid ribosomal-subunit... 0.02 OrthoFinder output from all 47 species
Ceric.07G017400.1 RPL2.1, Ceric.07G017400 not classified & original description: pacid=50626616... 0.02 OrthoFinder output from all 47 species
Ceric.1Z164200.1 RPL2.1, Ceric.1Z164200 not classified & original description: pacid=50596959... 0.02 OrthoFinder output from all 47 species
Ceric.38G057600.1 Ceric.38G057600 not classified & original description: pacid=50579815... 0.02 OrthoFinder output from all 47 species
Mp1g19370.1 No alias no hits & (original description: none) 0.02 OrthoFinder output from all 47 species
Ore_g43250 RPL2.1 component *(uL2c) of large plastid ribosomal-subunit... 0.02 OrthoFinder output from all 47 species
Pir_g37334 No alias component *(uL2m) of large mitoribosomal-subunit... 0.02 OrthoFinder output from all 47 species
Smo137825 RPL2.1 Protein biosynthesis.organelle translation... 0.02 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
MF GO:0003735 structural constituent of ribosome IEA Interproscan
CC GO:0005840 ribosome IEA Interproscan
BP GO:0006412 translation IEA Interproscan
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Type GO Term Name Evidence Source
MF GO:0003746 translation elongation factor activity IEP HCCA
MF GO:0004177 aminopeptidase activity IEP HCCA
BP GO:0006414 translational elongation IEP HCCA
BP GO:0006508 proteolysis IEP HCCA
MF GO:0008135 translation factor activity, RNA binding IEP HCCA
MF GO:0008233 peptidase activity IEP HCCA
MF GO:0008238 exopeptidase activity IEP HCCA
MF GO:0045182 translation regulator activity IEP HCCA
MF GO:0090079 translation regulator activity, nucleic acid binding IEP HCCA
InterPro domains Description Start Stop
IPR022669 Ribosomal_L2_C 1 117
No external refs found!