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  5. Zm00001e042237_P001

Zm00001e042237_P001 (RBCL, Zm00001e042237)


Aliases : RBCL, Zm00001e042237

Description : large subunit of ribulose-1,5-bisphosphat carboxylase/oxygenase heterodimer


Gene families : OG0002607 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0002607_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Zm00001e042237_P001

Target Alias Description ECC score Gene Family Method Actions
Aev_g01070 RBCL large subunit of ribulose-1,5-bisphosphat... 0.02 OrthoFinder output from all 47 species
MA_103636g0010 RBCL Ribulose bisphosphate carboxylase large chain... 0.01 OrthoFinder output from all 47 species
Mp3g01300.1 No alias no hits & (original description: none) 0.02 OrthoFinder output from all 47 species
Ore_g01544 RBCL large subunit of ribulose-1,5-bisphosphat... 0.02 OrthoFinder output from all 47 species
Smo137874 RBCL Photosynthesis.calvin cycle.ribulose-1,5-bisphosphat... 0.03 OrthoFinder output from all 47 species
Zm00001e036792_P001 RBCL, Zm00001e036792 Ribulose bisphosphate carboxylase large chain OS=Zea... 0.01 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
MF GO:0000287 magnesium ion binding IEA Interproscan
BP GO:0015977 carbon fixation IEA Interproscan
MF GO:0016984 ribulose-bisphosphate carboxylase activity IEA Interproscan
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Type GO Term Name Evidence Source
MF GO:0003735 structural constituent of ribosome IEP HCCA
MF GO:0005198 structural molecule activity IEP HCCA
CC GO:0005840 ribosome IEP HCCA
BP GO:0006412 translation IEP HCCA
BP GO:0006518 peptide metabolic process IEP HCCA
BP GO:0009058 biosynthetic process IEP HCCA
BP GO:0009059 macromolecule biosynthetic process IEP HCCA
BP GO:0034641 cellular nitrogen compound metabolic process IEP HCCA
BP GO:0034645 cellular macromolecule biosynthetic process IEP HCCA
BP GO:0043043 peptide biosynthetic process IEP HCCA
CC GO:0043226 organelle IEP HCCA
CC GO:0043228 non-membrane-bounded organelle IEP HCCA
CC GO:0043229 intracellular organelle IEP HCCA
CC GO:0043232 intracellular non-membrane-bounded organelle IEP HCCA
BP GO:0043603 amide metabolic process IEP HCCA
BP GO:0043604 amide biosynthetic process IEP HCCA
BP GO:0044249 cellular biosynthetic process IEP HCCA
BP GO:0044260 cellular macromolecule metabolic process IEP HCCA
BP GO:0044271 cellular nitrogen compound biosynthetic process IEP HCCA
BP GO:1901566 organonitrogen compound biosynthetic process IEP HCCA
BP GO:1901576 organic substance biosynthetic process IEP HCCA
InterPro domains Description Start Stop
IPR017443 RuBisCO_lsu_fd_N 31 151
IPR000685 RuBisCO_lsu_C 161 329
No external refs found!