Zm00001e041946_P001 (Zm00001e041946)

Aliases : Zm00001e041946

Description : light chain of clathrin triskelion

Gene families : OG0002188 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0002188_tree

Sequence : coding (download), protein (download)

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.

Type	Description	Actions
Neighborhood	HRR: Zm00001e041946_P001
Cluster	HCCA: Cluster_14

Target	Alias	Description	ECC score	Gene Family Method
Ala_g09868	No alias	light chain of clathrin triskelion & original description: none	0.02	OrthoFinder output from all 47 species
Ala_g10177	No alias	light chain of clathrin triskelion & original description: none	0.02	OrthoFinder output from all 47 species
Aspi01Gene18302.t1	Aspi01Gene18302	light chain of clathrin triskelion & original description: none	0.02	OrthoFinder output from all 47 species
Cba_g45811	No alias	light chain of clathrin triskelion & original description: none	0.03	OrthoFinder output from all 47 species
LOC_Os04g58240.1	LOC_Os04g58240	light chain of clathrin triskelion	0.04	OrthoFinder output from all 47 species
Ore_g30776	No alias	light chain of clathrin triskelion & original description: none	0.03	OrthoFinder output from all 47 species
Pir_g16953	No alias	light chain of clathrin triskelion & original description: none	0.03	OrthoFinder output from all 47 species
Sacu_v1.1_s0018.g007566	No alias	light chain of clathrin triskelion & original...	0.05	OrthoFinder output from all 47 species
Solyc03g006510.4.1	Solyc03g006510	light chain of clathrin triskelion	0.03	OrthoFinder output from all 47 species
Solyc07g054180.4.1	Solyc07g054180	light chain of clathrin triskelion	0.03	OrthoFinder output from all 47 species
Spa_g04777	No alias	light chain of clathrin triskelion & original description: none	0.04	OrthoFinder output from all 47 species

Type	GO Term	Name	Evidence	Source
MF	GO:0003674	molecular_function	None	Extended
MF	GO:0005198	structural molecule activity	IEA	Interproscan
CC	GO:0005575	cellular_component	None	Extended
BP	GO:0006810	transport	None	Extended
BP	GO:0006886	intracellular protein transport	IEA	Interproscan
BP	GO:0008104	protein localization	None	Extended
BP	GO:0008150	biological_process	None	Extended
BP	GO:0009987	cellular process	None	Extended
BP	GO:0015031	protein transport	None	Extended
BP	GO:0016192	vesicle-mediated transport	IEA	Interproscan
CC	GO:0030117	membrane coat	None	Extended
CC	GO:0030118	clathrin coat	None	Extended
CC	GO:0030120	vesicle coat	None	Extended
CC	GO:0030125	clathrin vesicle coat	None	Extended
CC	GO:0030130	clathrin coat of trans-Golgi network vesicle	IEA	Interproscan
CC	GO:0030132	clathrin coat of coated pit	IEA	Interproscan
CC	GO:0032991	protein-containing complex	None	Extended
BP	GO:0033036	macromolecule localization	None	Extended
BP	GO:0045184	establishment of protein localization	None	Extended
BP	GO:0046907	intracellular transport	None	Extended
BP	GO:0051179	localization	None	Extended
BP	GO:0051234	establishment of localization	None	Extended
BP	GO:0051641	cellular localization	None	Extended
BP	GO:0051649	establishment of localization in cell	None	Extended
BP	GO:0070727	cellular macromolecule localization	None	Extended
BP	GO:0071702	organic substance transport	None	Extended
BP	GO:0071705	nitrogen compound transport	None	Extended
CC	GO:0098796	membrane protein complex	None	Extended
CC	GO:0098797	plasma membrane protein complex	None	Extended

Type	GO Term	Name	Evidence	Source
BP	GO:0006897	endocytosis	IEP	HCCA
CC	GO:0030008	TRAPP complex	IEP	HCCA
CC	GO:0099023	vesicle tethering complex	IEP	HCCA
CC	GO:0140535	intracellular protein-containing complex	IEP	HCCA

InterPro domains	Description	Start	Stop
IPR000996	Clathrin_L-chain	128	264

External Links

No external refs found!