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  5. Zm00001e041723_P001

Zm00001e041723_P001 (AtOCT4, 4-Oct, Zm00001e041723)


Aliases : AtOCT4, 4-Oct, Zm00001e041723

Description : organic cation transporter (OCT)


Gene families : OG0001321 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0001321_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Zm00001e041723_P001

Target Alias Description ECC score Gene Family Method Actions
AT1G73220 AtOCT1, 1-Oct organic cation/carnitine transporter1 0.07 OrthoFinder output from all 47 species
Adi_g021310 AtOCT4, 4-Oct organic cation transporter *(OCT) & original description: none 0.03 OrthoFinder output from all 47 species
Als_g51667 AtOCT4, 4-Oct organic cation transporter *(OCT) & original description: none 0.02 OrthoFinder output from all 47 species
Aspi01Gene08959.t1 AtOCT4, 4-Oct,... organic cation transporter *(OCT) & original description: none 0.03 OrthoFinder output from all 47 species
Dcu_g10267 AtOCT4, 4-Oct organic cation transporter *(OCT) & original description: none 0.02 OrthoFinder output from all 47 species
Len_g08973 AtOCT4, 4-Oct organic cation transporter *(OCT) & original description: none 0.02 OrthoFinder output from all 47 species
Ppi_g29511 AtOCT4, 4-Oct organic cation transporter *(OCT) & original description: none 0.02 OrthoFinder output from all 47 species
Solyc05g053860.4.1 3-Oct, ATOCT3,... organic cation transporter (OCT) 0.04 OrthoFinder output from all 47 species
Solyc12g017380.3.1 3-Oct, ATOCT3,... organic cation transporter (OCT) 0.03 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
MF GO:0022857 transmembrane transporter activity IEA Interproscan
BP GO:0055085 transmembrane transport IEA Interproscan
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Type GO Term Name Evidence Source
BP GO:0000272 polysaccharide catabolic process IEP HCCA
BP GO:0005976 polysaccharide metabolic process IEP HCCA
BP GO:0006643 membrane lipid metabolic process IEP HCCA
BP GO:0006664 glycolipid metabolic process IEP HCCA
BP GO:0008610 lipid biosynthetic process IEP HCCA
BP GO:0009057 macromolecule catabolic process IEP HCCA
BP GO:0009247 glycolipid biosynthetic process IEP HCCA
BP GO:0016052 carbohydrate catabolic process IEP HCCA
MF GO:0016160 amylase activity IEP HCCA
MF GO:0016161 beta-amylase activity IEP HCCA
MF GO:0016758 hexosyltransferase activity IEP HCCA
BP GO:0044255 cellular lipid metabolic process IEP HCCA
BP GO:0046467 membrane lipid biosynthetic process IEP HCCA
BP GO:1901135 carbohydrate derivative metabolic process IEP HCCA
BP GO:1901137 carbohydrate derivative biosynthetic process IEP HCCA
BP GO:1903509 liposaccharide metabolic process IEP HCCA
InterPro domains Description Start Stop
IPR005828 MFS_sugar_transport-like 1 276
No external refs found!