Zm00001e041355_P001 (Zm00001e041355)


Aliases : Zm00001e041355

Description : Heterogeneous nuclear ribonucleoprotein Q OS=Arabidopsis thaliana (sp|q9asp6|hnrpq_arath : 97.8)


Gene families : OG0000677 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000677_tree

Sequence : coding (download), protein (download)


Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Zm00001e041355_P001

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00004p00121730 evm_27.TU.AmTr_v1... Heterogeneous nuclear ribonucleoprotein Q OS=Arabidopsis thaliana 0.05 OrthoFinder output from all 47 species
AMTR_s00027p00223150 evm_27.TU.AmTr_v1... No description available 0.05 OrthoFinder output from all 47 species
AMTR_s00087p00144100 evm_27.TU.AmTr_v1... Heterogeneous nuclear ribonucleoprotein Q OS=Arabidopsis thaliana 0.04 OrthoFinder output from all 47 species
AT2G44710 No alias RNA-binding (RRM/RBD/RNP motifs) family protein 0.09 OrthoFinder output from all 47 species
Adi_g068963 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Adi_g089100 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Adi_g107812 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species
Aev_g25318 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Aev_g32982 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species
Ala_g02224 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Als_g07470 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Aob_g03583 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Aop_g04897 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Aop_g68576 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Cba_g13364 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Ceric.03G033700.1 Ceric.03G033700 not classified & original description: pacid=50572646... 0.07 OrthoFinder output from all 47 species
Dcu_g01827 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Dcu_g01919 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Dcu_g10166 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
GSVIVT01015774001 No alias Heterogeneous nuclear ribonucleoprotein Q OS=Arabidopsis thaliana 0.05 OrthoFinder output from all 47 species
GSVIVT01018314001 No alias Heterogeneous nuclear ribonucleoprotein Q OS=Arabidopsis thaliana 0.03 OrthoFinder output from all 47 species
GSVIVT01018805001 No alias Heterogeneous nuclear ribonucleoprotein Q OS=Arabidopsis thaliana 0.05 OrthoFinder output from all 47 species
GSVIVT01022440001 No alias Heterogeneous nuclear ribonucleoprotein Q OS=Arabidopsis thaliana 0.03 OrthoFinder output from all 47 species
LOC_Os04g45930.3 LOC_Os04g45930 Heterogeneous nuclear ribonucleoprotein Q OS=Arabidopsis... 0.05 OrthoFinder output from all 47 species
LOC_Os10g08570.1 LOC_Os10g08570 no hits & (original description: none) 0.09 OrthoFinder output from all 47 species
Len_g09447 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Len_g10280 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Lfl_g06685 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Lfl_g12296 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Lfl_g38057 No alias not classified & original description: none 0.06 OrthoFinder output from all 47 species
MA_10436637g0010 No alias Heterogeneous nuclear ribonucleoprotein Q OS=Arabidopsis... 0.03 OrthoFinder output from all 47 species
MA_169053g0010 No alias Heterogeneous nuclear ribonucleoprotein Q OS=Arabidopsis... 0.02 OrthoFinder output from all 47 species
Nbi_g03804 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Nbi_g37255 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Ore_g02777 No alias not classified & original description: none 0.07 OrthoFinder output from all 47 species
Ore_g05005 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Ore_g18521 No alias not classified & original description: none 0.08 OrthoFinder output from all 47 species
Ore_g26284 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Ore_g26930 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ore_g44161 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species
Pir_g13590 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Ppi_g52296 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Solyc01g088800.4.1 Solyc01g088800 Heterogeneous nuclear ribonucleoprotein Q OS=Arabidopsis... 0.04 OrthoFinder output from all 47 species
Solyc02g062290.2.1 Solyc02g062290 Heterogeneous nuclear ribonucleoprotein Q OS=Arabidopsis... 0.07 OrthoFinder output from all 47 species
Solyc10g062340.2.1 Solyc10g062340 Heterogeneous nuclear ribonucleoprotein Q OS=Arabidopsis... 0.06 OrthoFinder output from all 47 species
Solyc10g076870.2.1 Solyc10g076870 Heterogeneous nuclear ribonucleoprotein Q OS=Arabidopsis... 0.03 OrthoFinder output from all 47 species
Spa_g02645 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Spa_g18541 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Tin_g08252 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Tin_g12919 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
MF GO:0003676 nucleic acid binding IEA Interproscan
Type GO Term Name Evidence Source
BP GO:0006396 RNA processing IEP HCCA
BP GO:0006397 mRNA processing IEP HCCA
BP GO:0016071 mRNA metabolic process IEP HCCA
InterPro domains Description Start Stop
IPR000504 RRM_dom 218 286
IPR000504 RRM_dom 298 363
IPR000504 RRM_dom 395 460
No external refs found!