Zm00001e040879_P001 (ERF110, Zm00001e040879)

Aliases : ERF110, Zm00001e040879

Description : Ethylene-responsive transcription factor RAP2-6 OS=Arabidopsis thaliana (sp|q7g1l2|rap26_arath : 88.6)

Gene families : OG0000003 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): No tree available for this family

Sequence : coding (download), protein (download)

Attention: This gene has low abundance.

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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.

Type	Description	Actions
Neighborhood	HRR: Zm00001e040879_P001

Target	Alias	Description	ECC score	Gene Family Method
AT4G36900	DEAR4, RAP2.10	related to AP2 10	0.05	OrthoFinder output from all 47 species
Adi_g016417	No alias	not classified & original description: none	0.03	OrthoFinder output from all 47 species
Als_g00575	No alias	cutin and suberin biosynthesis transcription factor...	0.03	OrthoFinder output from all 47 species
Als_g28739	DREB2A, DREB2	subgroup ERF-IV/DREB2 transcription factor & original...	0.03	OrthoFinder output from all 47 species
Als_g46307	ATERF12, ERF12	subgroup ERF-VIII transcription factor & original...	0.01	OrthoFinder output from all 47 species
Azfi_s0015.g014119	ATERF8, ATERF-8, ERF8	not classified & original description: CDS=1-357	0.04	OrthoFinder output from all 47 species
Cba_g07845	ERF72, EBP, ATEBP, RAP2.3	transcription factor component *(HRE/RAP2.12) of...	0.02	OrthoFinder output from all 47 species
Ceric.01G120100.1	HRE2, Ceric.01G120100	transcription factor component *(HRE/RAP2.12) of...	0.04	OrthoFinder output from all 47 species
Dcu_g05577	CRF3	subgroup ERF-VI transcription factor & original description: none	0.05	OrthoFinder output from all 47 species
Dcu_g25009	RAP2.2	transcription factor component *(HRE/RAP2.12) of...	0.01	OrthoFinder output from all 47 species
Dde_g12767	ATERF-9, ERF9, ATERF9	not classified & original description: none	0.03	OrthoFinder output from all 47 species
GSVIVT01013934001	No alias	RNA biosynthesis.transcriptional activation.AP2/ERF...	0.03	OrthoFinder output from all 47 species
Gb_35633	No alias	no hits & (original description: none)	0.02	OrthoFinder output from all 47 species
LOC_Os01g10370.1	tny, LOC_Os01g10370	transcription factor (DREB)	0.02	OrthoFinder output from all 47 species
LOC_Os02g06330.1	ATERF4, RAP2.5,...	no hits & (original description: none)	0.02	OrthoFinder output from all 47 species
LOC_Os02g34260.1	Rap2.6L, LOC_Os02g34260	transcription factor (ERF)	0.02	OrthoFinder output from all 47 species
LOC_Os02g34270.1	ERF110, LOC_Os02g34270	Ethylene-responsive transcription factor ERF114...	0.02	OrthoFinder output from all 47 species
LOC_Os03g08500.2	RAP2.2, LOC_Os03g08500	no hits & (original description: none)	0.03	OrthoFinder output from all 47 species
LOC_Os04g46440.1	ERF38, ATERF38,...	transcription factor (DREB)	0.03	OrthoFinder output from all 47 species
LOC_Os04g57340.1	ATERF3, ERF3,...	transcription factor (ERF)	0.02	OrthoFinder output from all 47 species
LOC_Os08g31580.1	RAP2.4, LOC_Os08g31580	transcription factor (DREB)	0.05	OrthoFinder output from all 47 species
LOC_Os10g38000.1	HRD, LOC_Os10g38000	transcription factor (DREB)	0.02	OrthoFinder output from all 47 species
Len_g15177	No alias	subgroup ERF-V transcription factor & original description: none	0.02	OrthoFinder output from all 47 species
Nbi_g08521	RAP2.1	not classified & original description: none	0.04	OrthoFinder output from all 47 species
Pir_g04273	ATERF-9, ERF9, ATERF9	subgroup ERF-VIII transcription factor & original...	0.02	OrthoFinder output from all 47 species
Pir_g09341	ATERF3, ERF3	subgroup ERF-VIII transcription factor & original...	0.02	OrthoFinder output from all 47 species
Pir_g18808	DEAR4, RAP2.10	not classified & original description: none	0.02	OrthoFinder output from all 47 species
Pir_g37576	No alias	not classified & original description: none	0.06	OrthoFinder output from all 47 species
Pir_g48776	No alias	not classified & original description: none	0.03	OrthoFinder output from all 47 species
Pir_g64650	DEAR1, CEJ1, ATERF#011	not classified & original description: none	0.02	OrthoFinder output from all 47 species
Ppi_g16821	RAP2.2	transcription factor component *(HRE/RAP2.12) of...	0.02	OrthoFinder output from all 47 species
Sacu_v1.1_s0036.g011575	DEAR1, CEJ1, ATERF#011	not classified & original description: CDS=1-717	0.03	OrthoFinder output from all 47 species
Sam_g09143	No alias	not classified & original description: none	0.02	OrthoFinder output from all 47 species
Spa_g16012	tny	subgroup ERF-III transcription factor & original...	0.02	OrthoFinder output from all 47 species

Type	GO Term	Name	Evidence	Source
MF	GO:0003674	molecular_function	None	Extended
MF	GO:0003700	DNA-binding transcription factor activity	IEA	Interproscan
BP	GO:0006355	regulation of DNA-templated transcription	IEA	Interproscan
BP	GO:0008150	biological_process	None	Extended
BP	GO:0009889	regulation of biosynthetic process	None	Extended
BP	GO:0010468	regulation of gene expression	None	Extended
BP	GO:0010556	regulation of macromolecule biosynthetic process	None	Extended
BP	GO:0019219	regulation of nucleobase-containing compound metabolic process	None	Extended
BP	GO:0019222	regulation of metabolic process	None	Extended
BP	GO:0031323	regulation of cellular metabolic process	None	Extended
BP	GO:0031326	regulation of cellular biosynthetic process	None	Extended
BP	GO:0050789	regulation of biological process	None	Extended
BP	GO:0050794	regulation of cellular process	None	Extended
BP	GO:0051171	regulation of nitrogen compound metabolic process	None	Extended
BP	GO:0051252	regulation of RNA metabolic process	None	Extended
BP	GO:0060255	regulation of macromolecule metabolic process	None	Extended
BP	GO:0065007	biological regulation	None	Extended
BP	GO:0080090	regulation of primary metabolic process	None	Extended
MF	GO:0140110	transcription regulator activity	None	Extended
BP	GO:1903506	regulation of nucleic acid-templated transcription	None	Extended
BP	GO:2001141	regulation of RNA biosynthetic process	None	Extended

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Type	GO Term	Name	Evidence	Source
BP	GO:0006810	transport	IEP	HCCA
BP	GO:0051179	localization	IEP	HCCA
BP	GO:0051234	establishment of localization	IEP	HCCA
BP	GO:0055085	transmembrane transport	IEP	HCCA

InterPro domains	Description	Start	Stop
IPR001471	AP2/ERF_dom	89	138

External Links

No external refs found!

Zm00001e040879_P001 (ERF110, Zm00001e040879)

Expression Profile

Co-expression Networks

Expression Context Conservation (ECC)

Functional Annotation