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Aliases : Zm00001e040837
Description : Probable F-box protein At2g36090 OS=Arabidopsis thaliana (sp|q9sih5|fb322_arath : 139.0)
Gene families : OG0001049 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0001049_tree
Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.
| Type | Description | Actions |
|---|---|---|
| Neighborhood | HRR: Zm00001e040837_P001 | |
| Cluster | HCCA: Cluster_112 |
| Target | Alias | Description | ECC score | Gene Family Method | Actions |
|---|---|---|---|---|---|
| AMTR_s00018p00031290 | evm_27.TU.AmTr_v1... | F-box protein At2g27310 OS=Arabidopsis thaliana | 0.1 | OrthoFinder output from all 47 species | |
| AT2G27310 | No alias | F-box family protein | 0.03 | OrthoFinder output from all 47 species | |
| AT3G44326 | No alias | F-box family protein | 0.03 | OrthoFinder output from all 47 species | |
| Aev_g04411 | SLY1 | substrate adaptor of SCF E3 ubiquitin ligase *(SLY) &... | 0.05 | OrthoFinder output from all 47 species | |
| Als_g60927 | No alias | not classified & original description: none | 0.02 | OrthoFinder output from all 47 species | |
| Aob_g04265 | SLY1 | substrate adaptor of SCF E3 ubiquitin ligase *(SLY) &... | 0.03 | OrthoFinder output from all 47 species | |
| Aob_g07109 | No alias | substrate adaptor of SCF E3 ubiquitin ligase *(SLY) &... | 0.02 | OrthoFinder output from all 47 species | |
| Aspi01Gene24799.t1 | Aspi01Gene24799 | substrate adaptor of SCF E3 ubiquitin ligase *(SLY) &... | 0.02 | OrthoFinder output from all 47 species | |
| Azfi_s0006.g010412 | SLY1 | not classified & original description: CDS=1-828 | 0.03 | OrthoFinder output from all 47 species | |
| Ceric.05G080600.1 | Ceric.05G080600 | substrate adaptor of SCF E3 ubiquitin ligase *(SLY) &... | 0.03 | OrthoFinder output from all 47 species | |
| GSVIVT01011119001 | No alias | Probable F-box protein At2g36090 OS=Arabidopsis thaliana | 0.03 | OrthoFinder output from all 47 species | |
| Gb_08963 | SLY1 | SLY-type gibberellin signal transducer. component F-box... | 0.02 | OrthoFinder output from all 47 species | |
| Gb_11568 | SLY1 | SLY-type gibberellin signal transducer. component F-box... | 0.04 | OrthoFinder output from all 47 species | |
| LOC_Os03g10040.1 | SLY2, LOC_Os03g10040 | SLY-type gibberellin signal transducer. component F-box... | 0.02 | OrthoFinder output from all 47 species | |
| LOC_Os04g33820.1 | LOC_Os04g33820 | Probable F-box protein At2g36090 OS=Arabidopsis thaliana... | 0.03 | OrthoFinder output from all 47 species | |
| LOC_Os11g05660.1 | LOC_Os11g05660 | Probable F-box protein At2g36090 OS=Arabidopsis thaliana... | 0.03 | OrthoFinder output from all 47 species | |
| LOC_Os12g06030.1 | LOC_Os12g06030 | Probable F-box protein At2g36090 OS=Arabidopsis thaliana... | 0.02 | OrthoFinder output from all 47 species | |
| MA_119267g0010 | SLY1 | SLY-type gibberellin signal transducer. component F-box... | 0.02 | OrthoFinder output from all 47 species | |
| MA_164016g0010 | SLY1 | SLY-type gibberellin signal transducer. component F-box... | 0.02 | OrthoFinder output from all 47 species | |
| MA_3236g0010 | SLY2 | SLY-type gibberellin signal transducer. component F-box... | 0.04 | OrthoFinder output from all 47 species | |
| MA_9868304g0010 | SLY1 | no hits & (original description: none) | 0.01 | OrthoFinder output from all 47 species | |
| Mp1g06600.1 | SLY1 | SLY-type gibberellin signal transducer. component F-box... | 0.01 | OrthoFinder output from all 47 species | |
| Mp5g06150.1 | No alias | SLY-type gibberellin signal transducer. component F-box... | 0.02 | OrthoFinder output from all 47 species | |
| Ore_g03590 | No alias | substrate adaptor of SCF E3 ubiquitin ligase *(SLY) &... | 0.04 | OrthoFinder output from all 47 species | |
| Ore_g06355 | No alias | substrate adaptor of SCF E3 ubiquitin ligase *(SLY) &... | 0.02 | OrthoFinder output from all 47 species | |
| Ore_g18489 | No alias | substrate adaptor of SCF E3 ubiquitin ligase *(SLY) &... | 0.05 | OrthoFinder output from all 47 species | |
| Ore_g21785 | No alias | not classified & original description: none | 0.02 | OrthoFinder output from all 47 species | |
| Ore_g26122 | SLY1 | substrate adaptor of SCF E3 ubiquitin ligase *(SLY) &... | 0.02 | OrthoFinder output from all 47 species | |
| Ore_g28804 | SLY1 | substrate adaptor of SCF E3 ubiquitin ligase *(SLY) &... | 0.02 | OrthoFinder output from all 47 species | |
| Ore_g32241 | No alias | substrate adaptor of SCF E3 ubiquitin ligase *(SLY) &... | 0.03 | OrthoFinder output from all 47 species | |
| Pnu_g12380 | SLY1 | substrate adaptor of SCF E3 ubiquitin ligase *(SLY) &... | 0.03 | OrthoFinder output from all 47 species | |
| Pnu_g17370 | SLY1 | substrate adaptor of SCF E3 ubiquitin ligase *(SLY) &... | 0.04 | OrthoFinder output from all 47 species | |
| Smo80605 | No alias | Probable F-box protein At2g36090 OS=Arabidopsis thaliana | 0.01 | OrthoFinder output from all 47 species | |
| Solyc10g083230.1.1 | Solyc10g083230 | Probable F-box protein At2g36090 OS=Arabidopsis thaliana... | 0.03 | OrthoFinder output from all 47 species | |
| Spa_g15092 | No alias | substrate adaptor of SCF E3 ubiquitin ligase *(SLY) &... | 0.02 | OrthoFinder output from all 47 species | |
| Zm00001e009127_P001 | Zm00001e009127 | Probable F-box protein At2g36090 OS=Arabidopsis thaliana... | 0.05 | OrthoFinder output from all 47 species | |
| Zm00001e014737_P001 | Zm00001e014737 | Probable F-box protein At2g36090 OS=Arabidopsis thaliana... | 0.03 | OrthoFinder output from all 47 species | |
| Zm00001e022823_P002 | SLY1, Zm00001e022823 | SLY-type gibberellin signal transducer. component F-box... | 0.03 | OrthoFinder output from all 47 species |
| Type | GO Term | Name | Evidence | Source |
|---|---|---|---|---|
No GO annotation available for this sequence |
| Type | GO Term | Name | Evidence | Source |
|---|---|---|---|---|
| MF | GO:0003700 | DNA-binding transcription factor activity | IEP | HCCA |
| BP | GO:0006355 | regulation of DNA-templated transcription | IEP | HCCA |
| BP | GO:0009889 | regulation of biosynthetic process | IEP | HCCA |
| BP | GO:0010468 | regulation of gene expression | IEP | HCCA |
| BP | GO:0010556 | regulation of macromolecule biosynthetic process | IEP | HCCA |
| MF | GO:0015035 | protein-disulfide reductase activity | IEP | HCCA |
| MF | GO:0015036 | disulfide oxidoreductase activity | IEP | HCCA |
| MF | GO:0016667 | oxidoreductase activity, acting on a sulfur group of donors | IEP | HCCA |
| BP | GO:0019219 | regulation of nucleobase-containing compound metabolic process | IEP | HCCA |
| BP | GO:0019222 | regulation of metabolic process | IEP | HCCA |
| BP | GO:0031323 | regulation of cellular metabolic process | IEP | HCCA |
| BP | GO:0031326 | regulation of cellular biosynthetic process | IEP | HCCA |
| BP | GO:0050789 | regulation of biological process | IEP | HCCA |
| BP | GO:0050794 | regulation of cellular process | IEP | HCCA |
| BP | GO:0051171 | regulation of nitrogen compound metabolic process | IEP | HCCA |
| BP | GO:0051252 | regulation of RNA metabolic process | IEP | HCCA |
| BP | GO:0060255 | regulation of macromolecule metabolic process | IEP | HCCA |
| BP | GO:0065007 | biological regulation | IEP | HCCA |
| BP | GO:0080090 | regulation of primary metabolic process | IEP | HCCA |
| MF | GO:0140110 | transcription regulator activity | IEP | HCCA |
| BP | GO:1903506 | regulation of nucleic acid-templated transcription | IEP | HCCA |
| BP | GO:2001141 | regulation of RNA biosynthetic process | IEP | HCCA |
No InterPro domains available for this sequence
| No external refs found! |