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Aliases : Zm00001e040314
Description : C3H zinc finger transcription factor
Gene families : OG0000859 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000859_tree
Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.
| Type | Description | Actions |
|---|---|---|
| Neighborhood | HRR: Zm00001e040314_P001 | |
| Cluster | HCCA: Cluster_137 |
| Target | Alias | Description | ECC score | Gene Family Method | Actions |
|---|---|---|---|---|---|
| AMTR_s00071p00110320 | evm_27.TU.AmTr_v1... | RNA biosynthesis.transcriptional activation.C3H zinc... | 0.04 | OrthoFinder output from all 47 species | |
| AMTR_s00154p00086540 | evm_27.TU.AmTr_v1... | Zinc finger CCCH domain-containing protein 38... | 0.04 | OrthoFinder output from all 47 species | |
| AMTR_s00154p00087040 | evm_27.TU.AmTr_v1... | No description available | 0.02 | OrthoFinder output from all 47 species | |
| AT3G18640 | No alias | Zinc finger C-x8-C-x5-C-x3-H type family protein | 0.05 | OrthoFinder output from all 47 species | |
| Adi_g020080 | No alias | component *(FES1) of FRI-C transcription effector... | 0.06 | OrthoFinder output from all 47 species | |
| Adi_g051624 | No alias | not classified & original description: none | 0.02 | OrthoFinder output from all 47 species | |
| Adi_g086845 | No alias | component *(FES1) of FRI-C transcription effector... | 0.04 | OrthoFinder output from all 47 species | |
| Ala_g14556 | No alias | component *(FES1) of FRI-C transcription effector... | 0.04 | OrthoFinder output from all 47 species | |
| Ala_g33431 | No alias | component *(FES1) of FRI-C transcription effector... | 0.04 | OrthoFinder output from all 47 species | |
| Ala_g38718 | No alias | component *(FES1) of FRI-C transcription effector... | 0.02 | OrthoFinder output from all 47 species | |
| Als_g05138 | No alias | component *(FES1) of FRI-C transcription effector... | 0.04 | OrthoFinder output from all 47 species | |
| Als_g21455 | No alias | not classified & original description: none | 0.05 | OrthoFinder output from all 47 species | |
| Als_g32464 | No alias | component *(FES1) of FRI-C transcription effector... | 0.05 | OrthoFinder output from all 47 species | |
| Aob_g22679 | No alias | component *(FES1) of FRI-C transcription effector... | 0.05 | OrthoFinder output from all 47 species | |
| Aob_g28684 | No alias | not classified & original description: none | 0.02 | OrthoFinder output from all 47 species | |
| Aop_g08771 | No alias | component *(FES1) of FRI-C transcription effector... | 0.03 | OrthoFinder output from all 47 species | |
| Aop_g31626 | No alias | component *(FES1) of FRI-C transcription effector... | 0.04 | OrthoFinder output from all 47 species | |
| Aspi01Gene04156.t1 | Aspi01Gene04156 | component *(FES1) of FRI-C transcription effector... | 0.02 | OrthoFinder output from all 47 species | |
| Cba_g01885 | No alias | component *(FES1) of FRI-C transcription effector... | 0.02 | OrthoFinder output from all 47 species | |
| Cba_g12381 | No alias | component *(FES1) of FRI-C transcription effector... | 0.04 | OrthoFinder output from all 47 species | |
| Cba_g23169 | No alias | component *(FES1) of FRI-C transcription effector... | 0.03 | OrthoFinder output from all 47 species | |
| Cba_g29388 | No alias | component *(FES1) of FRI-C transcription effector... | 0.02 | OrthoFinder output from all 47 species | |
| Ceric.09G003600.1 | Ceric.09G003600 | component *(FES1) of FRI-C transcription effector... | 0.11 | OrthoFinder output from all 47 species | |
| Ceric.20G066500.1 | Ceric.20G066500 | component *(FES1) of FRI-C transcription effector... | 0.13 | OrthoFinder output from all 47 species | |
| Ceric.20G084000.1 | Ceric.20G084000 | component *(FES1) of FRI-C transcription effector... | 0.11 | OrthoFinder output from all 47 species | |
| Ceric.29G050700.1 | Ceric.29G050700 | component *(FES1) of FRI-C transcription effector... | 0.05 | OrthoFinder output from all 47 species | |
| Cre01.g003450 | No alias | No description available | 0.03 | OrthoFinder output from all 47 species | |
| Dac_g06929 | No alias | component *(FES1) of FRI-C transcription effector... | 0.04 | OrthoFinder output from all 47 species | |
| Dcu_g07178 | No alias | component *(FES1) of FRI-C transcription effector... | 0.08 | OrthoFinder output from all 47 species | |
| Dcu_g08063 | No alias | component *(FES1) of FRI-C transcription effector... | 0.02 | OrthoFinder output from all 47 species | |
| Dde_g02390 | No alias | component *(FES1) of FRI-C transcription effector... | 0.04 | OrthoFinder output from all 47 species | |
| Ehy_g16622 | No alias | component *(FES1) of FRI-C transcription effector... | 0.03 | OrthoFinder output from all 47 species | |
| Ehy_g18865 | No alias | component *(FES1) of FRI-C transcription effector... | 0.03 | OrthoFinder output from all 47 species | |
| Ehy_g26937 | No alias | component *(FES1) of FRI-C transcription effector... | 0.06 | OrthoFinder output from all 47 species | |
| GSVIVT01008114001 | No alias | Zinc finger CCCH domain-containing protein 38... | 0.03 | OrthoFinder output from all 47 species | |
| GSVIVT01010035001 | ACCD | RNA biosynthesis.transcriptional activation.C3H zinc... | 0.08 | OrthoFinder output from all 47 species | |
| Gb_00875 | No alias | C3H zinc finger transcription factor | 0.04 | OrthoFinder output from all 47 species | |
| Gb_19122 | No alias | C3H zinc finger transcription factor | 0.09 | OrthoFinder output from all 47 species | |
| Gb_26302 | No alias | C3H zinc finger transcription factor | 0.06 | OrthoFinder output from all 47 species | |
| LOC_Os05g41790.1 | LOC_Os05g41790 | C3H zinc finger transcription factor | 0.09 | OrthoFinder output from all 47 species | |
| LOC_Os08g04170.1 | LOC_Os08g04170 | C3H zinc finger transcription factor | 0.11 | OrthoFinder output from all 47 species | |
| Len_g20647 | No alias | component *(FES1) of FRI-C transcription effector... | 0.04 | OrthoFinder output from all 47 species | |
| Len_g22996 | No alias | component *(FES1) of FRI-C transcription effector... | 0.02 | OrthoFinder output from all 47 species | |
| Len_g31683 | No alias | component *(FES1) of FRI-C transcription effector... | 0.03 | OrthoFinder output from all 47 species | |
| Lfl_g05738 | No alias | component *(FES1) of FRI-C transcription effector... | 0.04 | OrthoFinder output from all 47 species | |
| Lfl_g21498 | No alias | not classified & original description: none | 0.02 | OrthoFinder output from all 47 species | |
| Lfl_g29094 | No alias | component *(FES1) of FRI-C transcription effector... | 0.03 | OrthoFinder output from all 47 species | |
| MA_111475g0020 | No alias | no hits & (original description: none) | 0.03 | OrthoFinder output from all 47 species | |
| MA_321233g0010 | No alias | no hits & (original description: none) | 0.03 | OrthoFinder output from all 47 species | |
| MA_8408g0030 | No alias | no hits & (original description: none) | 0.04 | OrthoFinder output from all 47 species | |
| Mp1g05400.1 | No alias | Zinc finger CCCH domain-containing protein 55 OS=Oryza... | 0.08 | OrthoFinder output from all 47 species | |
| Msp_g14444 | No alias | component *(FES1) of FRI-C transcription effector... | 0.03 | OrthoFinder output from all 47 species | |
| Msp_g19470 | No alias | component *(FES1) of FRI-C transcription effector... | 0.05 | OrthoFinder output from all 47 species | |
| Nbi_g04479 | No alias | component *(FES1) of FRI-C transcription effector... | 0.07 | OrthoFinder output from all 47 species | |
| Nbi_g22586 | No alias | component *(FES1) of FRI-C transcription effector... | 0.02 | OrthoFinder output from all 47 species | |
| Nbi_g33981 | No alias | component *(FES1) of FRI-C transcription effector... | 0.03 | OrthoFinder output from all 47 species | |
| Ore_g08246 | No alias | not classified & original description: none | 0.02 | OrthoFinder output from all 47 species | |
| Ore_g18230 | No alias | component *(FES1) of FRI-C transcription effector... | 0.03 | OrthoFinder output from all 47 species | |
| Ore_g25353 | No alias | component *(FES1) of FRI-C transcription effector... | 0.03 | OrthoFinder output from all 47 species | |
| Ore_g30501 | No alias | component *(FES1) of FRI-C transcription effector... | 0.04 | OrthoFinder output from all 47 species | |
| Ore_g37073 | No alias | component *(FES1) of FRI-C transcription effector... | 0.02 | OrthoFinder output from all 47 species | |
| Pir_g18853 | No alias | component *(FES1) of FRI-C transcription effector... | 0.08 | OrthoFinder output from all 47 species | |
| Pir_g61674 | No alias | component *(FES1) of FRI-C transcription effector... | 0.04 | OrthoFinder output from all 47 species | |
| Pnu_g26023 | No alias | component *(FES1) of FRI-C transcription effector... | 0.03 | OrthoFinder output from all 47 species | |
| Pnu_g27062 | No alias | component *(FES1) of FRI-C transcription effector... | 0.03 | OrthoFinder output from all 47 species | |
| Ppi_g08786 | No alias | component *(FES1) of FRI-C transcription effector... | 0.03 | OrthoFinder output from all 47 species | |
| Ppi_g11003 | No alias | component *(FES1) of FRI-C transcription effector... | 0.04 | OrthoFinder output from all 47 species | |
| Ppi_g43758 | No alias | component *(FES1) of FRI-C transcription effector... | 0.04 | OrthoFinder output from all 47 species | |
| Sacu_v1.1_s0001.g000565 | No alias | component *(FES1) of FRI-C transcription effector... | 0.03 | OrthoFinder output from all 47 species | |
| Sam_g30142 | No alias | component *(FES1) of FRI-C transcription effector... | 0.04 | OrthoFinder output from all 47 species | |
| Smo439131 | No alias | No description available | 0.02 | OrthoFinder output from all 47 species | |
| Solyc03g006350.3.1 | FES1, Solyc03g006350 | C3H zinc finger transcription factor | 0.06 | OrthoFinder output from all 47 species | |
| Solyc04g064800.4.1 | Solyc04g064800 | C3H zinc finger transcription factor | 0.05 | OrthoFinder output from all 47 species | |
| Solyc06g069440.3.1 | Solyc06g069440 | Zinc finger CCCH domain-containing protein 38... | 0.05 | OrthoFinder output from all 47 species | |
| Spa_g08435 | No alias | component *(FES1) of FRI-C transcription effector... | 0.03 | OrthoFinder output from all 47 species | |
| Spa_g19280 | No alias | component *(FES1) of FRI-C transcription effector... | 0.03 | OrthoFinder output from all 47 species | |
| Spa_g53143 | No alias | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Tin_g10851 | No alias | component *(FES1) of FRI-C transcription effector... | 0.05 | OrthoFinder output from all 47 species | |
| Tin_g20286 | No alias | component *(FES1) of FRI-C transcription effector... | 0.03 | OrthoFinder output from all 47 species | |
| Tin_g26553 | No alias | component *(FES1) of FRI-C transcription effector... | 0.03 | OrthoFinder output from all 47 species |
| Type | GO Term | Name | Evidence | Source |
|---|---|---|---|---|
No GO annotation available for this sequence |
| Type | GO Term | Name | Evidence | Source |
|---|---|---|---|---|
| MF | GO:0000166 | nucleotide binding | IEP | HCCA |
| MF | GO:0003674 | molecular_function | IEP | HCCA |
| MF | GO:0003676 | nucleic acid binding | IEP | HCCA |
| MF | GO:0003712 | transcription coregulator activity | IEP | HCCA |
| MF | GO:0003723 | RNA binding | IEP | HCCA |
| MF | GO:0003724 | RNA helicase activity | IEP | HCCA |
| MF | GO:0004386 | helicase activity | IEP | HCCA |
| MF | GO:0005488 | binding | IEP | HCCA |
| MF | GO:0005524 | ATP binding | IEP | HCCA |
| CC | GO:0005575 | cellular_component | IEP | HCCA |
| BP | GO:0006357 | regulation of transcription by RNA polymerase II | IEP | HCCA |
| MF | GO:0008186 | ATP-dependent activity, acting on RNA | IEP | HCCA |
| CC | GO:0016592 | mediator complex | IEP | HCCA |
| MF | GO:0017076 | purine nucleotide binding | IEP | HCCA |
| CC | GO:0018995 | host cellular component | IEP | HCCA |
| MF | GO:0030554 | adenyl nucleotide binding | IEP | HCCA |
| MF | GO:0032553 | ribonucleotide binding | IEP | HCCA |
| MF | GO:0032555 | purine ribonucleotide binding | IEP | HCCA |
| MF | GO:0032559 | adenyl ribonucleotide binding | IEP | HCCA |
| CC | GO:0033643 | host cell part | IEP | HCCA |
| CC | GO:0033646 | host intracellular part | IEP | HCCA |
| CC | GO:0033647 | host intracellular organelle | IEP | HCCA |
| CC | GO:0033648 | host intracellular membrane-bounded organelle | IEP | HCCA |
| MF | GO:0035639 | purine ribonucleoside triphosphate binding | IEP | HCCA |
| MF | GO:0036094 | small molecule binding | IEP | HCCA |
| CC | GO:0042025 | host cell nucleus | IEP | HCCA |
| MF | GO:0043167 | ion binding | IEP | HCCA |
| MF | GO:0043168 | anion binding | IEP | HCCA |
| MF | GO:0097159 | organic cyclic compound binding | IEP | HCCA |
| MF | GO:0097367 | carbohydrate derivative binding | IEP | HCCA |
| CC | GO:0110165 | cellular anatomical entity | IEP | HCCA |
| MF | GO:0140640 | catalytic activity, acting on a nucleic acid | IEP | HCCA |
| MF | GO:0140657 | ATP-dependent activity | IEP | HCCA |
| MF | GO:1901265 | nucleoside phosphate binding | IEP | HCCA |
| MF | GO:1901363 | heterocyclic compound binding | IEP | HCCA |
| No external refs found! |