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  5. Zm00001e040313_P001

Zm00001e040313_P001 (TRP2, TSB1, ATTSB1,...)


Aliases : TRP2, TSB1, ATTSB1, TRPB, Zm00001e040313

Description : subunit beta of tryptophan synthase complex


Gene families : OG0002978 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0002978_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Zm00001e040313_P001

Target Alias Description ECC score Gene Family Method Actions
AT5G54810 TRP2, TSB1, ATTSB1, TRPB tryptophan synthase beta-subunit 1 0.03 OrthoFinder output from all 47 species
Cre03.g161400 TRP2, TSB1, ATTSB1, TRPB Amino acid metabolism.biosynthesis.shikimate... 0.02 OrthoFinder output from all 47 species
LOC_Os08g04180.1 TSB2, LOC_Os08g04180 subunit beta of tryptophan synthase complex 0.03 OrthoFinder output from all 47 species
Pir_g44277 TRP2, TSB1, ATTSB1, TRPB EC_4.2 carbon-oxygen lyase & original description: none 0.01 OrthoFinder output from all 47 species
Solyc10g006400.3.1 TRP2, TSB1,... subunit beta of tryptophan synthase complex 0.03 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
MF GO:0003674 molecular_function IEP HCCA
MF GO:0004834 tryptophan synthase activity IEP HCCA
MF GO:0005506 iron ion binding IEP HCCA
BP GO:0006082 organic acid metabolic process IEP HCCA
BP GO:0006520 amino acid metabolic process IEP HCCA
BP GO:0006568 tryptophan metabolic process IEP HCCA
BP GO:0006576 biogenic amine metabolic process IEP HCCA
BP GO:0006586 indolalkylamine metabolic process IEP HCCA
BP GO:0006629 lipid metabolic process IEP HCCA
BP GO:0008152 metabolic process IEP HCCA
BP GO:0008610 lipid biosynthetic process IEP HCCA
BP GO:0009072 aromatic amino acid metabolic process IEP HCCA
BP GO:0009308 amine metabolic process IEP HCCA
MF GO:0016829 lyase activity IEP HCCA
MF GO:0016835 carbon-oxygen lyase activity IEP HCCA
MF GO:0016836 hydro-lyase activity IEP HCCA
BP GO:0019752 carboxylic acid metabolic process IEP HCCA
BP GO:0042430 indole-containing compound metabolic process IEP HCCA
MF GO:0043167 ion binding IEP HCCA
BP GO:0043436 oxoacid metabolic process IEP HCCA
BP GO:0044238 primary metabolic process IEP HCCA
BP GO:0044281 small molecule metabolic process IEP HCCA
MF GO:0050660 flavin adenine dinucleotide binding IEP HCCA
BP GO:0071704 organic substance metabolic process IEP HCCA
MF GO:0071949 FAD binding IEP HCCA
BP GO:1901605 alpha-amino acid metabolic process IEP HCCA
InterPro domains Description Start Stop
IPR001926 TrpB-like_PALP 134 464
No external refs found!