Zm00001e040289_P001 (Zm00001e040289)

Aliases : Zm00001e040289

Description : aromatic L-amino acid decarboxylase

Gene families : OG0003989 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0003989_tree

Sequence : coding (download), protein (download)

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.

Type	Description	Actions
Neighborhood	HRR: Zm00001e040289_P001
Cluster	HCCA: Cluster_72

Target	Alias	Description	ECC score	Gene Family Method
AMTR_s00024p00231980	evm_27.TU.AmTr_v1...	Secondary metabolism.nitrogen-containing secondary...	0.02	OrthoFinder output from all 47 species
AMTR_s00092p00055440	evm_27.TU.AmTr_v1...	Secondary metabolism.nitrogen-containing secondary...	0.03	OrthoFinder output from all 47 species
AMTR_s00092p00059730	evm_27.TU.AmTr_v1...	Secondary metabolism.nitrogen-containing secondary...	0.03	OrthoFinder output from all 47 species
LOC_Os08g04540.1	LOC_Os08g04540	aromatic L-amino acid decarboxylase	0.05	OrthoFinder output from all 47 species
LOC_Os10g23900.1	LOC_Os10g23900	aromatic L-amino acid decarboxylase	0.03	OrthoFinder output from all 47 species
Mp7g06530.1	No alias	aromatic L-amino acid decarboxylase	0.02	OrthoFinder output from all 47 species
Smo84876	No alias	Secondary metabolism.nitrogen-containing secondary...	0.03	OrthoFinder output from all 47 species
Zm00001e000632_P001	Zm00001e000632	aromatic L-amino acid decarboxylase	0.06	OrthoFinder output from all 47 species
Zm00001e000634_P001	Zm00001e000634	aromatic L-amino acid decarboxylase	0.03	OrthoFinder output from all 47 species

Type	GO Term	Name	Evidence	Source
MF	GO:0003674	molecular_function	None	Extended
MF	GO:0003824	catalytic activity	None	Extended
MF	GO:0005488	binding	None	Extended
BP	GO:0006082	organic acid metabolic process	None	Extended
BP	GO:0008150	biological_process	None	Extended
BP	GO:0008152	metabolic process	None	Extended
BP	GO:0009987	cellular process	None	Extended
MF	GO:0016829	lyase activity	None	Extended
MF	GO:0016830	carbon-carbon lyase activity	None	Extended
MF	GO:0016831	carboxy-lyase activity	IEA	Interproscan
BP	GO:0019752	carboxylic acid metabolic process	IEA	Interproscan
MF	GO:0019842	vitamin binding	None	Extended
MF	GO:0030170	pyridoxal phosphate binding	IEA	Interproscan
MF	GO:0036094	small molecule binding	None	Extended
MF	GO:0043167	ion binding	None	Extended
MF	GO:0043168	anion binding	None	Extended
BP	GO:0043436	oxoacid metabolic process	None	Extended
BP	GO:0044237	cellular metabolic process	None	Extended
BP	GO:0044281	small molecule metabolic process	None	Extended
MF	GO:0070279	vitamin B6 binding	None	Extended
BP	GO:0071704	organic substance metabolic process	None	Extended
MF	GO:0097159	organic cyclic compound binding	None	Extended
MF	GO:1901363	heterocyclic compound binding	None	Extended

Type	GO Term	Name	Evidence	Source
MF	GO:0004180	carboxypeptidase activity	IEP	HCCA
MF	GO:0004185	serine-type carboxypeptidase activity	IEP	HCCA
MF	GO:0005506	iron ion binding	IEP	HCCA
MF	GO:0005507	copper ion binding	IEP	HCCA
BP	GO:0006813	potassium ion transport	IEP	HCCA
MF	GO:0008238	exopeptidase activity	IEP	HCCA
MF	GO:0015079	potassium ion transmembrane transporter activity	IEP	HCCA
MF	GO:0016491	oxidoreductase activity	IEP	HCCA
MF	GO:0016705	oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen	IEP	HCCA
MF	GO:0016846	carbon-sulfur lyase activity	IEP	HCCA
MF	GO:0020037	heme binding	IEP	HCCA
MF	GO:0043169	cation binding	IEP	HCCA
MF	GO:0046872	metal ion binding	IEP	HCCA
MF	GO:0046906	tetrapyrrole binding	IEP	HCCA
MF	GO:0046914	transition metal ion binding	IEP	HCCA
BP	GO:0055114	obsolete oxidation-reduction process	IEP	HCCA
MF	GO:0070008	serine-type exopeptidase activity	IEP	HCCA
BP	GO:0071805	potassium ion transmembrane transport	IEP	HCCA

InterPro domains	Description	Start	Stop
IPR002129	PyrdxlP-dep_de-COase	59	442

External Links

No external refs found!