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  5. Zm00001e039805_P002

Zm00001e039805_P002 (HSP93-V, DCA1,...)


Aliases : HSP93-V, DCA1, ATHSP93-V, CLPC, CLPC1, Zm00001e039805

Description : chaperone component ClpC of chloroplast Clp-type protease complex


Gene families : OG0000193 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000193_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Zm00001e039805_P002

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00016p00164160 HSP93-V, DCA1,... External stimuli response.temperature.Hsp... 0.06 OrthoFinder output from all 47 species
AMTR_s00065p00179810 CLPB4, CLPB-M,... External stimuli response.temperature.Hsp... 0.03 OrthoFinder output from all 47 species
AMTR_s00110p00042430 CLPB3, CLPB-P,... External stimuli response.temperature.Hsp... 0.06 OrthoFinder output from all 47 species
AT5G50920 HSP93-V, DCA1,... CLPC homologue 1 0.05 OrthoFinder output from all 47 species
Adi_g010878 CLPB3, CLPB-P, APG6 organellar chaperone *(Clp-p/Clp-m) & original description: none 0.02 OrthoFinder output from all 47 species
Aev_g28850 HSP93-V, DCA1,... chaperone component *(ClpC) of chloroplast Clp-type... 0.03 OrthoFinder output from all 47 species
Ala_g11691 HSP93-V, DCA1,... chaperone component *(ClpC) of chloroplast Clp-type... 0.03 OrthoFinder output from all 47 species
Als_g32977 HSP93-V, DCA1,... chaperone component *(ClpC) of chloroplast Clp-type... 0.03 OrthoFinder output from all 47 species
Aob_g06718 HSP93-V, DCA1,... chaperone component *(ClpC) of chloroplast Clp-type... 0.02 OrthoFinder output from all 47 species
Aop_g08864 HSP93-V, DCA1,... chaperone component *(ClpC) of chloroplast Clp-type... 0.04 OrthoFinder output from all 47 species
Aop_g22434 HSP93-V, DCA1,... chaperone component *(ClpC) of chloroplast Clp-type... 0.02 OrthoFinder output from all 47 species
Cba_g04072 HSP93-V, DCA1,... chaperone component *(ClpC) of chloroplast Clp-type... 0.02 OrthoFinder output from all 47 species
Ceric.15G073100.1 HSP93-V, DCA1,... chaperone component *(ClpC) of chloroplast Clp-type... 0.06 OrthoFinder output from all 47 species
Ceric.30G013400.1 SAG15, CLPD,... chaperone component *(ClpD) of chloroplast Clp-type... 0.03 OrthoFinder output from all 47 species
Cre02.g143307 No alias No description available 0.03 OrthoFinder output from all 47 species
Dac_g04714 HSP93-V, DCA1,... chaperone component *(ClpC) of chloroplast Clp-type... 0.03 OrthoFinder output from all 47 species
Dcu_g14360 HSP93-V, DCA1,... chaperone component *(ClpC) of chloroplast Clp-type... 0.04 OrthoFinder output from all 47 species
Dde_g24879 HSP93-V, DCA1,... chaperone component *(ClpC) of chloroplast Clp-type... 0.07 OrthoFinder output from all 47 species
GSVIVT01008635001 No alias No description available 0.03 OrthoFinder output from all 47 species
GSVIVT01008636001 HSP93-V, DCA1,... External stimuli response.temperature.Hsp... 0.05 OrthoFinder output from all 47 species
LOC_Os12g12850.1 HSP93-V, DCA1,... chaperone component ClpC of chloroplast Clp-type protease complex 0.13 OrthoFinder output from all 47 species
MA_1160713g0010 HSP93-V, DCA1,... ATP-dependent Clp protease ATP-binding subunit ClpA... 0.02 OrthoFinder output from all 47 species
MA_596288g0010 HSP93-V, DCA1,... Chaperone protein ClpC1, chloroplastic OS=Oryza sativa... 0.04 OrthoFinder output from all 47 species
MA_8117g0010 HSP93-V, DCA1,... ATP-dependent Clp protease ATP-binding subunit ClpA... 0.03 OrthoFinder output from all 47 species
Msp_g23938 HSP93-V, DCA1,... chaperone component *(ClpC) of chloroplast Clp-type... 0.02 OrthoFinder output from all 47 species
Nbi_g10414 HSP93-V, DCA1,... chaperone component *(ClpC) of chloroplast Clp-type... 0.03 OrthoFinder output from all 47 species
Ore_g29985 HSP93-V, DCA1,... chaperone component *(ClpC) of chloroplast Clp-type... 0.04 OrthoFinder output from all 47 species
Pir_g16592 CLPB3, CLPB-P, APG6 not classified & original description: none 0.02 OrthoFinder output from all 47 species
Sacu_v1.1_s0024.g009060 CLPB3, CLPB-P, APG6 organellar chaperone *(Clp-p/Clp-m) & original... 0.03 OrthoFinder output from all 47 species
Sam_g16601 No alias chaperone component *(ClpC) of chloroplast Clp-type... 0.06 OrthoFinder output from all 47 species
Sam_g16602 No alias chaperone component *(ClpC) of chloroplast Clp-type... 0.03 OrthoFinder output from all 47 species
Sam_g19448 No alias organellar chaperone *(Clp-p/Clp-m) & original description: none 0.04 OrthoFinder output from all 47 species
Sam_g42976 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Sam_g51825 No alias chaperone component *(ClpD) of chloroplast Clp-type... 0.03 OrthoFinder output from all 47 species
Spa_g19032 HSP93-V, DCA1,... chaperone component *(ClpC) of chloroplast Clp-type... 0.06 OrthoFinder output from all 47 species
Spa_g46302 CLPB3, CLPB-P, APG6 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Spa_g47608 HSP93-V, DCA1,... chaperone component *(ClpC) of chloroplast Clp-type... 0.05 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
MF GO:0005524 ATP binding IEA Interproscan
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Type GO Term Name Evidence Source
MF GO:0004222 metalloendopeptidase activity IEP HCCA
BP GO:0006066 alcohol metabolic process IEP HCCA
BP GO:0006766 vitamin metabolic process IEP HCCA
BP GO:0006767 water-soluble vitamin metabolic process IEP HCCA
BP GO:0006772 thiamine metabolic process IEP HCCA
BP GO:0006790 sulfur compound metabolic process IEP HCCA
MF GO:0008237 metallopeptidase activity IEP HCCA
BP GO:0009110 vitamin biosynthetic process IEP HCCA
BP GO:0009228 thiamine biosynthetic process IEP HCCA
BP GO:0034308 primary alcohol metabolic process IEP HCCA
BP GO:0034309 primary alcohol biosynthetic process IEP HCCA
BP GO:0042364 water-soluble vitamin biosynthetic process IEP HCCA
BP GO:0042723 thiamine-containing compound metabolic process IEP HCCA
BP GO:0042724 thiamine-containing compound biosynthetic process IEP HCCA
BP GO:0044272 sulfur compound biosynthetic process IEP HCCA
BP GO:0044283 small molecule biosynthetic process IEP HCCA
BP GO:0046165 alcohol biosynthetic process IEP HCCA
MF GO:0051536 iron-sulfur cluster binding IEP HCCA
MF GO:0051540 metal cluster binding IEP HCCA
BP GO:0072527 pyrimidine-containing compound metabolic process IEP HCCA
BP GO:0072528 pyrimidine-containing compound biosynthetic process IEP HCCA
BP GO:1901615 organic hydroxy compound metabolic process IEP HCCA
BP GO:1901617 organic hydroxy compound biosynthetic process IEP HCCA
InterPro domains Description Start Stop
IPR003959 ATPase_AAA_core 296 412
IPR003959 ATPase_AAA_core 633 807
IPR019489 Clp_ATPase_C 814 893
IPR004176 Clp_R_dom 181 232
IPR004176 Clp_R_dom 105 157
IPR041546 ClpA/ClpB_AAA_lid 434 535
No external refs found!