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  5. Zm00001e039709_P004

Zm00001e039709_P004 (GC6, MAG4, Zm00001e039709)


Aliases : GC6, MAG4, Zm00001e039709

Description : golgin (GC6)


Gene families : OG0005705 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0005705_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Zm00001e039709_P004

Target Alias Description ECC score Gene Family Method Actions
Ala_g02272 GC6, MAG4 Golgin-type membrane tethering protein *(GC6) & original... 0.03 OrthoFinder output from all 47 species
Als_g09657 GC6, MAG4 Golgin-type membrane tethering protein *(GC6) & original... 0.03 OrthoFinder output from all 47 species
Aop_g02253 GC6, MAG4 Golgin-type membrane tethering protein *(GC6) & original... 0.02 OrthoFinder output from all 47 species
Cpa|evm.model.tig00020816.67 GC6, MAG4 Vesicle trafficking.target membrane tethering.Golgi... 0.01 OrthoFinder output from all 47 species
Dcu_g03141 GC6, MAG4 Golgin-type membrane tethering protein *(GC6) & original... 0.03 OrthoFinder output from all 47 species
GSVIVT01000649001 GC6, MAG4 Vesicle trafficking.target membrane tethering.Golgi... 0.05 OrthoFinder output from all 47 species
LOC_Os12g35360.1 GC6, MAG4, LOC_Os12g35360 golgin (GC6) 0.04 OrthoFinder output from all 47 species
Lfl_g11544 GC6, MAG4 Golgin-type membrane tethering protein *(GC6) & original... 0.03 OrthoFinder output from all 47 species
Msp_g15740 GC6, MAG4 Golgin-type membrane tethering protein *(GC6) & original... 0.02 OrthoFinder output from all 47 species
Sam_g12548 No alias Golgin-type membrane tethering protein *(GC6) & original... 0.03 OrthoFinder output from all 47 species
Solyc02g084490.1.1 GC6, MAG4, Solyc02g084490 golgin (GC6) 0.03 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
CC GO:0000139 Golgi membrane IEA Interproscan
CC GO:0005737 cytoplasm IEA Interproscan
BP GO:0006886 intracellular protein transport IEA Interproscan
BP GO:0016192 vesicle-mediated transport IEA Interproscan
BP GO:0048280 vesicle fusion with Golgi apparatus IEA Interproscan
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Type GO Term Name Evidence Source
MF GO:0003755 peptidyl-prolyl cis-trans isomerase activity IEP HCCA
MF GO:0005543 phospholipid binding IEP HCCA
MF GO:0008289 lipid binding IEP HCCA
MF GO:0008641 ubiquitin-like modifier activating enzyme activity IEP HCCA
MF GO:0016409 palmitoyltransferase activity IEP HCCA
BP GO:0016567 protein ubiquitination IEP HCCA
MF GO:0016859 cis-trans isomerase activity IEP HCCA
MF GO:0016877 ligase activity, forming carbon-sulfur bonds IEP HCCA
BP GO:0032446 protein modification by small protein conjugation IEP HCCA
MF GO:0035091 phosphatidylinositol binding IEP HCCA
MF GO:0140096 catalytic activity, acting on a protein IEP HCCA
InterPro domains Description Start Stop
IPR006953 Vesicle_Uso1_P115_head 378 692
IPR006955 Uso1_p115_C 797 925
No external refs found!