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  5. Zm00001e039606_P001

Zm00001e039606_P001 (CYC3B, CYCA2;2,...)


Aliases : CYC3B, CYCA2;2, CYC2BAT, Zm00001e039606

Description : cyclin (CYCA)


Gene families : OG0001097 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0001097_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Zm00001e039606_P001

Target Alias Description ECC score Gene Family Method Actions
Azfi_s0051.g031411 CYCA1;1 not classified & original description: CDS=319-1644 0.03 OrthoFinder output from all 47 species
Ceric.26G030100.1 CYCA1;1, Ceric.26G030100 regulatory protein *(TAM) involved in metaphase to... 0.02 OrthoFinder output from all 47 species
Ceric.30G011000.1 CYCA1;1, Ceric.30G011000 regulatory protein *(TAM) involved in metaphase to... 0.02 OrthoFinder output from all 47 species
Ceric.33G050700.1 CYCA1;1, Ceric.33G050700 regulatory protein *(TAM) involved in metaphase to... 0.02 OrthoFinder output from all 47 species
Dcu_g31687 CYCA1;1 regulatory protein *(CYCA) of cell cycle & original... 0.02 OrthoFinder output from all 47 species
GSVIVT01008823001 CYCA1;1 Cell cycle.regulation.cyclins.CYCA-type cyclin 0.02 OrthoFinder output from all 47 species
GSVIVT01037895001 CYCA3;4 Cell cycle.regulation.cyclins.CYCA-type cyclin 0.04 OrthoFinder output from all 47 species
Len_g01814 CYCA1;1 regulatory protein *(CYCA) of cell cycle & original... 0.03 OrthoFinder output from all 47 species
Len_g21318 CYCA1;1 regulatory protein *(TAM) involved in metaphase to... 0.04 OrthoFinder output from all 47 species
Msp_g12560 CYCA1;1 regulatory protein *(TAM) involved in metaphase to... 0.02 OrthoFinder output from all 47 species
Nbi_g24493 CYCA1;1 regulatory protein *(TAM) involved in metaphase to... 0.02 OrthoFinder output from all 47 species
Ore_g35611 CYCA1;1 regulatory protein *(TAM) involved in metaphase to... 0.03 OrthoFinder output from all 47 species
Sam_g12488 No alias regulatory protein *(TAM) involved in metaphase to... 0.02 OrthoFinder output from all 47 species
Sam_g12489 No alias regulatory protein *(TAM) involved in metaphase to... 0.02 OrthoFinder output from all 47 species
Sam_g51377 No alias regulatory protein *(TAM) involved in metaphase to... 0.04 OrthoFinder output from all 47 species
Solyc11g005090.2.1 CYCA1;1, Solyc11g005090 cyclin (CYCA) 0.03 OrthoFinder output from all 47 species
Spa_g11267 CYCA1;1 regulatory protein *(TAM) involved in metaphase to... 0.04 OrthoFinder output from all 47 species
Spa_g39403 CYCA1;1 regulatory protein *(TAM) involved in metaphase to... 0.04 OrthoFinder output from all 47 species
Tin_g03369 CYCA1;1 regulatory protein *(TAM) involved in metaphase to... 0.02 OrthoFinder output from all 47 species
Tin_g30126 CYCA1;1 regulatory protein *(TAM) involved in metaphase to... 0.02 OrthoFinder output from all 47 species
Zm00001e026125_P002 CYCA1;1, Zm00001e026125 cyclin (CYCA) 0.04 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
CC GO:0042025 host cell nucleus IEA Interproscan
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Type GO Term Name Evidence Source
BP GO:0006886 intracellular protein transport IEP HCCA
BP GO:0008104 protein localization IEP HCCA
BP GO:0015031 protein transport IEP HCCA
BP GO:0033036 macromolecule localization IEP HCCA
BP GO:0045184 establishment of protein localization IEP HCCA
BP GO:0046907 intracellular transport IEP HCCA
BP GO:0051641 cellular localization IEP HCCA
BP GO:0051649 establishment of localization in cell IEP HCCA
BP GO:0070727 cellular macromolecule localization IEP HCCA
BP GO:0071702 organic substance transport IEP HCCA
BP GO:0071705 nitrogen compound transport IEP HCCA
InterPro domains Description Start Stop
IPR006671 Cyclin_N 225 351
IPR004367 Cyclin_C-dom 354 476
No external refs found!