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  5. Zm00001e039584_P001

Zm00001e039584_P001 (SEU, Zm00001e039584)


Aliases : SEU, Zm00001e039584

Description : Transcriptional corepressor SEUSS OS=Arabidopsis thaliana (sp|q8w234|seuss_arath : 389.0)


Gene families : OG0000747 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000747_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Zm00001e039584_P001
Cluster HCCA: Cluster_137

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00069p00119460 SLK2,... Probable transcriptional regulator SLK2 OS=Arabidopsis thaliana 0.04 OrthoFinder output from all 47 species
AT1G43850 SEU SEUSS transcriptional co-regulator 0.03 OrthoFinder output from all 47 species
Adi_g016540 SEU adapter component *(SEU/SLK) of transcriptional... 0.04 OrthoFinder output from all 47 species
Adi_g086246 SEU adapter component *(SEU/SLK) of transcriptional... 0.02 OrthoFinder output from all 47 species
Adi_g106397 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Ala_g02698 SEU adapter component *(SEU/SLK) of transcriptional... 0.03 OrthoFinder output from all 47 species
Aob_g23087 SEU adapter component *(SEU/SLK) of transcriptional... 0.03 OrthoFinder output from all 47 species
Aop_g21250 SEU adapter component *(SEU/SLK) of transcriptional... 0.03 OrthoFinder output from all 47 species
Aspi01Gene39070.t1 SEU, Aspi01Gene39070 adapter component *(SEU/SLK) of transcriptional... 0.02 OrthoFinder output from all 47 species
Cba_g75940 SEU adapter component *(SEU/SLK) of transcriptional... 0.05 OrthoFinder output from all 47 species
Ceric.01G063700.1 SEU, Ceric.01G063700 adapter component *(SEU/SLK) of transcriptional... 0.09 OrthoFinder output from all 47 species
Ceric.03G041400.1 SEU, Ceric.03G041400 adapter component *(SEU/SLK) of transcriptional... 0.1 OrthoFinder output from all 47 species
Ceric.33G034400.1 SEU, Ceric.33G034400 adapter component *(SEU/SLK) of transcriptional... 0.02 OrthoFinder output from all 47 species
Dde_g00969 SEU adapter component *(SEU/SLK) of transcriptional... 0.02 OrthoFinder output from all 47 species
Ehy_g23719 SEU adapter component *(SEU/SLK) of transcriptional... 0.09 OrthoFinder output from all 47 species
GSVIVT01010013001 SEU Transcriptional corepressor SEUSS OS=Arabidopsis thaliana 0.09 OrthoFinder output from all 47 species
GSVIVT01010616001 SLK2 Probable transcriptional regulator SLK2 OS=Arabidopsis thaliana 0.05 OrthoFinder output from all 47 species
Gb_04218 SEU Transcriptional corepressor SEUSS OS=Arabidopsis... 0.03 OrthoFinder output from all 47 species
Gb_04695 SLK2 Probable transcriptional regulator SLK2 OS=Arabidopsis... 0.03 OrthoFinder output from all 47 species
Gb_27183 SEU Transcriptional corepressor SEUSS OS=Arabidopsis... 0.07 OrthoFinder output from all 47 species
LOC_Os06g03600.1 SLK2, LOC_Os06g03600 Probable transcriptional regulator SLK2 OS=Arabidopsis... 0.04 OrthoFinder output from all 47 species
LOC_Os11g10060.1 SEU, LOC_Os11g10060 Transcriptional corepressor SEUSS OS=Arabidopsis... 0.04 OrthoFinder output from all 47 species
LOC_Os11g10070.1 SEU, LOC_Os11g10070 Transcriptional corepressor SEUSS OS=Arabidopsis... 0.03 OrthoFinder output from all 47 species
Len_g05463 SEU adapter component *(SEU/SLK) of transcriptional... 0.02 OrthoFinder output from all 47 species
Len_g41806 SEU adapter component *(SEU/SLK) of transcriptional... 0.05 OrthoFinder output from all 47 species
Lfl_g05019 SEU adapter component *(SEU/SLK) of transcriptional... 0.04 OrthoFinder output from all 47 species
Lfl_g06246 SEU adapter component *(SEU/SLK) of transcriptional... 0.02 OrthoFinder output from all 47 species
MA_12796g0010 SEU Transcriptional corepressor SEUSS OS=Arabidopsis... 0.05 OrthoFinder output from all 47 species
MA_13825g0010 No alias no hits & (original description: none) 0.03 OrthoFinder output from all 47 species
MA_208023g0010 SLK2 no hits & (original description: none) 0.03 OrthoFinder output from all 47 species
MA_33392g0010 SLK2 Probable transcriptional regulator SLK2 OS=Arabidopsis... 0.04 OrthoFinder output from all 47 species
Nbi_g03852 SEU adapter component *(SEU/SLK) of transcriptional... 0.07 OrthoFinder output from all 47 species
Ore_g15709 SEU adapter component *(SEU/SLK) of transcriptional... 0.02 OrthoFinder output from all 47 species
Ore_g42762 SEU adapter component *(SEU/SLK) of transcriptional... 0.03 OrthoFinder output from all 47 species
Pir_g13626 SEU adapter component *(SEU/SLK) of transcriptional... 0.03 OrthoFinder output from all 47 species
Sam_g25017 No alias adapter component *(SEU/SLK) of transcriptional... 0.02 OrthoFinder output from all 47 species
Sam_g29533 No alias adapter component *(SEU/SLK) of transcriptional... 0.02 OrthoFinder output from all 47 species
Sam_g51729 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Solyc03g026190.3.1 SLK2, Solyc03g026190 Probable transcriptional regulator SLK2 OS=Arabidopsis... 0.06 OrthoFinder output from all 47 species
Solyc06g059750.3.1 SEU, Solyc06g059750 Transcriptional corepressor SEUSS OS=Arabidopsis... 0.07 OrthoFinder output from all 47 species
Solyc06g059760.3.1 SEU, Solyc06g059760 Transcriptional corepressor SEUSS OS=Arabidopsis... 0.12 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
MF GO:0003674 molecular_function IEP HCCA
MF GO:0003676 nucleic acid binding IEP HCCA
MF GO:0003924 GTPase activity IEP HCCA
MF GO:0005488 binding IEP HCCA
MF GO:0005515 protein binding IEP HCCA
BP GO:0007165 signal transduction IEP HCCA
BP GO:0007186 G protein-coupled receptor signaling pathway IEP HCCA
MF GO:0016462 pyrophosphatase activity IEP HCCA
MF GO:0017111 ribonucleoside triphosphate phosphatase activity IEP HCCA
MF GO:0019001 guanyl nucleotide binding IEP HCCA
MF GO:0031683 G-protein beta/gamma-subunit complex binding IEP HCCA
MF GO:0044877 protein-containing complex binding IEP HCCA
MF GO:0097159 organic cyclic compound binding IEP HCCA
MF GO:1901363 heterocyclic compound binding IEP HCCA
InterPro domains Description Start Stop
IPR029005 LIM-bd/SEUSS 350 603
No external refs found!