Aliases : PUB44, SAUL1, ATPUB44, Zm00001e039535
Description : E3 ubiquitin ligase (PUB)
Gene families : OG0001077 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0001077_tree
Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.
Type | Description | Actions |
---|---|---|
Neighborhood | HRR: Zm00001e039535_P001 | |
Cluster | HCCA: Cluster_163 |
Target | Alias | Description | ECC score | Gene Family Method | Actions |
---|---|---|---|---|---|
AMTR_s00044p00145170 | PUB44, SAUL1,... | Protein degradation.peptide tagging.Ubiquitin... | 0.06 | OrthoFinder output from all 47 species | |
Adi_g023614 | No alias | E3 ubiquitin ligase *(SAUL) & original description: none | 0.02 | OrthoFinder output from all 47 species | |
Aev_g03391 | PUB44, SAUL1, ATPUB44 | E3 ubiquitin ligase *(SAUL) & original description: none | 0.03 | OrthoFinder output from all 47 species | |
Als_g15192 | PUB44, SAUL1, ATPUB44 | E3 ubiquitin ligase *(SAUL) & original description: none | 0.02 | OrthoFinder output from all 47 species | |
Ceric.03G039300.1 | PUB44, SAUL1,... | E3 ubiquitin ligase *(SAUL) & original description:... | 0.03 | OrthoFinder output from all 47 species | |
Ceric.03G046500.1 | PUB44, SAUL1,... | E3 ubiquitin ligase *(SAUL) & original description:... | 0.03 | OrthoFinder output from all 47 species | |
Ceric.03G047200.1 | PUB44, SAUL1,... | E3 ubiquitin ligase *(SAUL) & original description:... | 0.02 | OrthoFinder output from all 47 species | |
Ceric.14G057700.1 | PUB44, SAUL1,... | E3 ubiquitin ligase *(SAUL) & original description:... | 0.03 | OrthoFinder output from all 47 species | |
Dcu_g03175 | PUB44, SAUL1, ATPUB44 | E3 ubiquitin ligase *(SAUL) & original description: none | 0.03 | OrthoFinder output from all 47 species | |
Dcu_g07733 | PUB44, SAUL1, ATPUB44 | E3 ubiquitin ligase *(SAUL) & original description: none | 0.02 | OrthoFinder output from all 47 species | |
Dde_g02338 | PUB44, SAUL1, ATPUB44 | E3 ubiquitin ligase *(SAUL) & original description: none | 0.02 | OrthoFinder output from all 47 species | |
GSVIVT01013395001 | PUB44, SAUL1, ATPUB44 | Protein degradation.peptide tagging.Ubiquitin... | 0.03 | OrthoFinder output from all 47 species | |
GSVIVT01024723001 | PUB44, SAUL1, ATPUB44 | Protein degradation.peptide tagging.Ubiquitin... | 0.06 | OrthoFinder output from all 47 species | |
LOC_Os12g17900.1 | PUB44, SAUL1,... | E3 ubiquitin ligase (PUB) | 0.07 | OrthoFinder output from all 47 species | |
Mp8g11800.1 | PUB44, SAUL1, ATPUB44 | E3 ubiquitin ligase (PUB) | 0.03 | OrthoFinder output from all 47 species | |
Sacu_v1.1_s0013.g005849 | PUB44, SAUL1, ATPUB44 | E3 ubiquitin ligase *(SAUL) & original description: CDS=1044-4076 | 0.02 | OrthoFinder output from all 47 species | |
Sam_g19458 | No alias | E3 ubiquitin ligase *(SAUL) & original description: none | 0.04 | OrthoFinder output from all 47 species | |
Sam_g35802 | No alias | E3 ubiquitin ligase *(SAUL) & original description: none | 0.04 | OrthoFinder output from all 47 species | |
Solyc04g082570.3.1 | PUB44, SAUL1,... | E3 ubiquitin ligase (PUB) | 0.04 | OrthoFinder output from all 47 species | |
Spa_g05726 | PUB44, SAUL1, ATPUB44 | E3 ubiquitin ligase *(SAUL) & original description: none | 0.03 | OrthoFinder output from all 47 species | |
Tin_g02165 | No alias | E3 ubiquiTin ligase *(SAUL) & original description: none | 0.03 | OrthoFinder output from all 47 species | |
Tin_g03480 | PUB44, SAUL1, ATPUB44 | E3 ubiquiTin ligase *(SAUL) & original description: none | 0.02 | OrthoFinder output from all 47 species |
Type | GO Term | Name | Evidence | Source |
---|---|---|---|---|
MF | GO:0004842 | ubiquitin-protein transferase activity | IEA | Interproscan |
BP | GO:0016567 | protein ubiquitination | IEA | Interproscan |
Type | GO Term | Name | Evidence | Source |
---|---|---|---|---|
MF | GO:0000155 | phosphorelay sensor kinase activity | IEP | HCCA |
CC | GO:0000159 | protein phosphatase type 2A complex | IEP | HCCA |
MF | GO:0000166 | nucleotide binding | IEP | HCCA |
MF | GO:0003682 | chromatin binding | IEP | HCCA |
MF | GO:0004672 | protein kinase activity | IEP | HCCA |
MF | GO:0004673 | protein histidine kinase activity | IEP | HCCA |
MF | GO:0005488 | binding | IEP | HCCA |
MF | GO:0005515 | protein binding | IEP | HCCA |
MF | GO:0005524 | ATP binding | IEP | HCCA |
CC | GO:0005575 | cellular_component | IEP | HCCA |
CC | GO:0005634 | nucleus | IEP | HCCA |
BP | GO:0006468 | protein phosphorylation | IEP | HCCA |
BP | GO:0006793 | phosphorus metabolic process | IEP | HCCA |
BP | GO:0006796 | phosphate-containing compound metabolic process | IEP | HCCA |
BP | GO:0007165 | signal transduction | IEP | HCCA |
CC | GO:0008287 | protein serine/threonine phosphatase complex | IEP | HCCA |
BP | GO:0009987 | cellular process | IEP | HCCA |
MF | GO:0016301 | kinase activity | IEP | HCCA |
BP | GO:0016310 | phosphorylation | IEP | HCCA |
MF | GO:0016409 | palmitoyltransferase activity | IEP | HCCA |
MF | GO:0016772 | transferase activity, transferring phosphorus-containing groups | IEP | HCCA |
MF | GO:0016773 | phosphotransferase activity, alcohol group as acceptor | IEP | HCCA |
MF | GO:0016775 | phosphotransferase activity, nitrogenous group as acceptor | IEP | HCCA |
MF | GO:0017076 | purine nucleotide binding | IEP | HCCA |
MF | GO:0019208 | phosphatase regulator activity | IEP | HCCA |
MF | GO:0019888 | protein phosphatase regulator activity | IEP | HCCA |
MF | GO:0030554 | adenyl nucleotide binding | IEP | HCCA |
MF | GO:0032553 | ribonucleotide binding | IEP | HCCA |
MF | GO:0032555 | purine ribonucleotide binding | IEP | HCCA |
MF | GO:0032559 | adenyl ribonucleotide binding | IEP | HCCA |
MF | GO:0035639 | purine ribonucleoside triphosphate binding | IEP | HCCA |
MF | GO:0036094 | small molecule binding | IEP | HCCA |
MF | GO:0043168 | anion binding | IEP | HCCA |
CC | GO:0043226 | organelle | IEP | HCCA |
CC | GO:0043227 | membrane-bounded organelle | IEP | HCCA |
CC | GO:0043229 | intracellular organelle | IEP | HCCA |
CC | GO:0043231 | intracellular membrane-bounded organelle | IEP | HCCA |
BP | GO:0044237 | cellular metabolic process | IEP | HCCA |
MF | GO:0097159 | organic cyclic compound binding | IEP | HCCA |
MF | GO:0097367 | carbohydrate derivative binding | IEP | HCCA |
CC | GO:0110165 | cellular anatomical entity | IEP | HCCA |
MF | GO:0140299 | small molecule sensor activity | IEP | HCCA |
MF | GO:1901265 | nucleoside phosphate binding | IEP | HCCA |
MF | GO:1901363 | heterocyclic compound binding | IEP | HCCA |
CC | GO:1903293 | phosphatase complex | IEP | HCCA |
InterPro domains | Description | Start | Stop |
---|---|---|---|
IPR003613 | Ubox_domain | 26 | 100 |
No external refs found! |