Zm00001e039469_P001 (GATA12, Zm00001e039469)

Aliases : GATA12, Zm00001e039469

Description : transcription factor (GATA)

Gene families : OG0000100 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000100_tree

Sequence : coding (download), protein (download)

Attention: This gene has low abundance.

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.

Type	Description	Actions
Neighborhood	HRR: Zm00001e039469_P001
Cluster	HCCA: Cluster_107

Target	Alias	Description	ECC score	Gene Family Method
AMTR_s00017p00242860	evm_27.TU.AmTr_v1...	RNA biosynthesis.transcriptional activation.C2C2...	0.03	OrthoFinder output from all 47 species
AMTR_s00056p00080350	GATA9,...	RNA biosynthesis.transcriptional activation.C2C2...	0.03	OrthoFinder output from all 47 species
AMTR_s00155p00085360	GATA11,...	RNA biosynthesis.transcriptional activation.C2C2...	0.02	OrthoFinder output from all 47 species
AT2G18380	GATA20	GATA transcription factor 20	0.03	OrthoFinder output from all 47 species
AT2G28340	GATA13	GATA transcription factor 13	0.03	OrthoFinder output from all 47 species
AT2G45050	GATA2	GATA transcription factor 2	0.03	OrthoFinder output from all 47 species
AT3G20750	GATA29	GATA transcription factor 29	0.03	OrthoFinder output from all 47 species
AT3G60530	GATA4	GATA transcription factor 4	0.03	OrthoFinder output from all 47 species
AT5G26930	GATA23	GATA transcription factor 23	0.03	OrthoFinder output from all 47 species
Adi_g021303	GATA4	transcription factor *(A/B-GATA) & original description: none	0.02	OrthoFinder output from all 47 species
Adi_g036776	GATA5	transcription factor *(A/B-GATA) & original description: none	0.02	OrthoFinder output from all 47 species
Adi_g058313	GATA4	transcription factor *(A/B-GATA) & original description: none	0.02	OrthoFinder output from all 47 species
Adi_g065556	GATA9	transcription factor *(A/B-GATA) & original description: none	0.03	OrthoFinder output from all 47 species
Aev_g01113	GATA5	transcription factor *(A/B-GATA) & original description: none	0.03	OrthoFinder output from all 47 species
Als_g07273	GATA12	transcription factor *(A/B-GATA) & original description: none	0.03	OrthoFinder output from all 47 species
Als_g12533	GATA5	transcription factor *(A/B-GATA) & original description: none	0.01	OrthoFinder output from all 47 species
Aspi01Gene12734.t1	GATA5, Aspi01Gene12734	transcription factor *(A/B-GATA) & original description: none	0.03	OrthoFinder output from all 47 species
Aspi01Gene30025.t1	GATA5, Aspi01Gene30025	transcription factor *(A/B-GATA) & original description: none	0.03	OrthoFinder output from all 47 species
Aspi01Gene64140.t1	GATA4, Aspi01Gene64140	transcription factor *(A/B-GATA) & original description: none	0.03	OrthoFinder output from all 47 species
Azfi_s1514.g103937	GATA20	transcription factor *(A/B-GATA) & original description:...	0.02	OrthoFinder output from all 47 species
Cba_g07631	GNC, GATA21	transcription factor *(A/B-GATA) & original description: none	0.02	OrthoFinder output from all 47 species
Cba_g70889	GATA7	transcription factor *(A/B-GATA) & original description: none	0.01	OrthoFinder output from all 47 species
Dac_g00642	GATA9	transcription factor *(A/B-GATA) & original description: none	0.02	OrthoFinder output from all 47 species
Dcu_g15306	GATA9	transcription factor *(A/B-GATA) & original description: none	0.02	OrthoFinder output from all 47 species
Ehy_g21727	GATA1	transcription factor *(A/B-GATA) & original description: none	0.02	OrthoFinder output from all 47 species
GSVIVT01035614001	No alias	RNA biosynthesis.transcriptional activation.C2C2...	0.03	OrthoFinder output from all 47 species
Gb_06864	GATA9	transcription factor (GATA)	0.02	OrthoFinder output from all 47 species
Gb_25568	GATA20	transcription factor (GATA)	0.02	OrthoFinder output from all 47 species
LOC_Os02g56250.1	BME3-ZF, BME3,...	transcription factor (GATA)	0.03	OrthoFinder output from all 47 species
LOC_Os03g05160.1	BME3-ZF, BME3,...	transcription factor (GATA)	0.02	OrthoFinder output from all 47 species
LOC_Os05g44400.1	GATA12, LOC_Os05g44400	transcription factor (GATA)	0.03	OrthoFinder output from all 47 species
LOC_Os05g50270.1	GATA19, LOC_Os05g50270	transcription factor (GATA)	0.03	OrthoFinder output from all 47 species
LOC_Os10g32070.1	GATA1, LOC_Os10g32070	transcription factor (GATA)	0.08	OrthoFinder output from all 47 species
LOC_Os10g40810.1	GATA2, LOC_Os10g40810	transcription factor (GATA)	0.02	OrthoFinder output from all 47 species
LOC_Os12g07120.1	GATA14, LOC_Os12g07120	transcription factor (GATA)	0.09	OrthoFinder output from all 47 species
LOC_Os12g42970.1	GATA4, LOC_Os12g42970	transcription factor (GATA)	0.02	OrthoFinder output from all 47 species
Len_g46521	GATA5	transcription factor *(A/B-GATA) & original description: none	0.02	OrthoFinder output from all 47 species
Lfl_g28449	GATA5	transcription factor *(A/B-GATA) & original description: none	0.01	OrthoFinder output from all 47 species
MA_82238g0030	No alias	no hits & (original description: none)	0.01	OrthoFinder output from all 47 species
MA_92522g0010	GATA20	transcription factor (GATA)	0.03	OrthoFinder output from all 47 species
Msp_g37564	GATA5	transcription factor *(A/B-GATA) & original description: none	0.02	OrthoFinder output from all 47 species
Msp_g48249	GATA9	transcription factor *(A/B-GATA) & original description: none	0.02	OrthoFinder output from all 47 species
Nbi_g02094	GATA9	transcription factor *(A/B-GATA) & original description: none	0.02	OrthoFinder output from all 47 species
Ore_g27417	GNC, GATA21	transcription factor *(A/B-GATA) & original description: none	0.02	OrthoFinder output from all 47 species
Ore_g31511	GATA2	transcription factor *(A/B-GATA) & original description: none	0.02	OrthoFinder output from all 47 species
Pir_g06393	GATA6	transcription factor *(A/B-GATA) & original description: none	0.02	OrthoFinder output from all 47 species
Pir_g09526	GATA5	transcription factor *(A/B-GATA) & original description: none	0.02	OrthoFinder output from all 47 species
Pir_g24351	No alias	not classified & original description: none	0.02	OrthoFinder output from all 47 species
Pir_g37666	BME3-ZF, BME3, GATA8	transcription factor *(A/B-GATA) & original description: none	0.03	OrthoFinder output from all 47 species
Ppi_g06282	GATA5	transcription factor *(A/B-GATA) & original description: none	0.02	OrthoFinder output from all 47 species
Sacu_v1.1_s0024.g009072	GATA4	transcription factor *(A/B-GATA) & original description:...	0.02	OrthoFinder output from all 47 species
Sacu_v1.1_s0072.g016909	GATA9	transcription factor *(A/B-GATA) & original description:...	0.03	OrthoFinder output from all 47 species
Sacu_v1.1_s0146.g023073	GATA9	transcription factor *(A/B-GATA) & original description:...	0.03	OrthoFinder output from all 47 species
Sacu_v1.1_s0158.g023789	GATA6	transcription factor *(A/B-GATA) & original description:...	0.03	OrthoFinder output from all 47 species
Solyc01g060490.4.1	GATA17, Solyc01g060490	transcription factor (GATA)	0.03	OrthoFinder output from all 47 species
Solyc01g110310.3.1	GATA5, Solyc01g110310	transcription factor (GATA)	0.02	OrthoFinder output from all 47 species
Solyc04g015360.3.1	BME3-ZF, BME3,...	transcription factor (GATA)	0.03	OrthoFinder output from all 47 species
Solyc08g066510.3.1	GATA12, Solyc08g066510	transcription factor (GATA)	0.02	OrthoFinder output from all 47 species
Solyc10g018560.2.1	GATA4, Solyc10g018560	transcription factor (GATA)	0.03	OrthoFinder output from all 47 species
Spa_g06254	GATA9	transcription factor *(A/B-GATA) & original description: none	0.02	OrthoFinder output from all 47 species
Spa_g15861	GATA12	transcription factor *(A/B-GATA) & original description: none	0.03	OrthoFinder output from all 47 species
Spa_g29922	GATA12	transcription factor *(A/B-GATA) & original description: none	0.03	OrthoFinder output from all 47 species
Zm00001e020243_P001	GATA20, Zm00001e020243	transcription factor (GATA)	0.03	OrthoFinder output from all 47 species
Zm00001e026601_P001	GATA20, Zm00001e026601	transcription factor (GATA)	0.03	OrthoFinder output from all 47 species
Zm00001e029060_P002	GATA9, Zm00001e029060	transcription factor (GATA)	0.03	OrthoFinder output from all 47 species
Zm00001e032513_P001	Zm00001e032513	no hits & (original description: none)	0.03	OrthoFinder output from all 47 species
Zm00001e037876_P002	GATA4, Zm00001e037876	transcription factor (GATA)	0.04	OrthoFinder output from all 47 species
Zm00001e038971_P001	GATA12, Zm00001e038971	transcription factor (GATA)	0.02	OrthoFinder output from all 47 species

Type	GO Term	Name	Evidence	Source
MF	GO:0003674	molecular_function	None	Extended
MF	GO:0003676	nucleic acid binding	None	Extended
MF	GO:0003677	DNA binding	None	Extended
MF	GO:0005488	binding	None	Extended
BP	GO:0006355	regulation of DNA-templated transcription	IEA	Interproscan
BP	GO:0008150	biological_process	None	Extended
MF	GO:0008270	zinc ion binding	IEA	Interproscan
BP	GO:0009889	regulation of biosynthetic process	None	Extended
BP	GO:0010468	regulation of gene expression	None	Extended
BP	GO:0010556	regulation of macromolecule biosynthetic process	None	Extended
BP	GO:0019219	regulation of nucleobase-containing compound metabolic process	None	Extended
BP	GO:0019222	regulation of metabolic process	None	Extended
BP	GO:0031323	regulation of cellular metabolic process	None	Extended
BP	GO:0031326	regulation of cellular biosynthetic process	None	Extended
MF	GO:0043167	ion binding	None	Extended
MF	GO:0043169	cation binding	None	Extended
MF	GO:0043565	sequence-specific DNA binding	IEA	Interproscan
MF	GO:0046872	metal ion binding	None	Extended
MF	GO:0046914	transition metal ion binding	None	Extended
BP	GO:0050789	regulation of biological process	None	Extended
BP	GO:0050794	regulation of cellular process	None	Extended
BP	GO:0051171	regulation of nitrogen compound metabolic process	None	Extended
BP	GO:0051252	regulation of RNA metabolic process	None	Extended
BP	GO:0060255	regulation of macromolecule metabolic process	None	Extended
BP	GO:0065007	biological regulation	None	Extended
BP	GO:0080090	regulation of primary metabolic process	None	Extended
MF	GO:0097159	organic cyclic compound binding	None	Extended
MF	GO:1901363	heterocyclic compound binding	None	Extended
BP	GO:1903506	regulation of nucleic acid-templated transcription	None	Extended
BP	GO:2001141	regulation of RNA biosynthetic process	None	Extended

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Type	GO Term	Name	Evidence	Source
MF	GO:0008080	N-acetyltransferase activity	IEP	HCCA
MF	GO:0016407	acetyltransferase activity	IEP	HCCA
MF	GO:0016410	N-acyltransferase activity	IEP	HCCA
MF	GO:0016701	oxidoreductase activity, acting on single donors with incorporation of molecular oxygen	IEP	HCCA
MF	GO:0016702	oxidoreductase activity, acting on single donors with incorporation of molecular oxygen, incorporation of two atoms of oxygen	IEP	HCCA
MF	GO:0045735	nutrient reservoir activity	IEP	HCCA
MF	GO:0051213	dioxygenase activity	IEP	HCCA

InterPro domains	Description	Start	Stop
IPR000679	Znf_GATA	309	342
IPR000679	Znf_GATA	147	180

External Links

No external refs found!

Zm00001e039469_P001 (GATA12, Zm00001e039469)

Expression Profile

Co-expression Networks

Expression Context Conservation (ECC)

Functional Annotation