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  5. Zm00001e039170_P001

Zm00001e039170_P001 (ATUBA2, UBA 2, Zm00001e039170)


Aliases : ATUBA2, UBA 2, Zm00001e039170

Description : ubiquitin-activating E1 protein


Gene families : OG0000675 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000675_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Zm00001e039170_P001

Target Alias Description ECC score Gene Family Method Actions
AT2G30110 UBA1, MOS5, ATUBA1 ubiquitin-activating enzyme 1 0.05 OrthoFinder output from all 47 species
Adi_g001009 UBA1, MOS5, ATUBA1 not classified & original description: none 0.02 OrthoFinder output from all 47 species
Aev_g18272 UBA1, MOS5, ATUBA1 E1 ubiquitin-activating enzyme & original description: none 0.03 OrthoFinder output from all 47 species
Ala_g04704 UBA1, MOS5, ATUBA1 E1 ubiquitin-activating enzyme & original description: none 0.02 OrthoFinder output from all 47 species
Ala_g05605 UBA1, MOS5, ATUBA1 E1 ubiquitin-activating enzyme & original description: none 0.04 OrthoFinder output from all 47 species
Aspi01Gene19298.t1 UBA1, MOS5,... not classified & original description: none 0.03 OrthoFinder output from all 47 species
Aspi01Gene53403.t2 ATUBA2, UBA 2,... E1 ubiquitin-activating enzyme & original description: none 0.03 OrthoFinder output from all 47 species
Ceric.1Z131100.1 ATUBA2, UBA 2,... E1 ubiquitin-activating enzyme & original description:... 0.02 OrthoFinder output from all 47 species
Ceric.34G062100.1 UBA1, MOS5,... E1 ubiquitin-activating enzyme & original description:... 0.02 OrthoFinder output from all 47 species
Cpa|evm.model.tig00000057.43 UBA1, MOS5, ATUBA1 Protein degradation.peptide tagging.Ubiquitin... 0.02 OrthoFinder output from all 47 species
Cre09.g386400 ATUBA2, UBA 2 Protein degradation.peptide tagging.Ubiquitin... 0.09 OrthoFinder output from all 47 species
Dcu_g09946 UBA1, MOS5, ATUBA1 E1 ubiquitin-activating enzyme & original description: none 0.02 OrthoFinder output from all 47 species
Gb_00042 UBA1, MOS5, ATUBA1 ubiquitin-activating E1 protein 0.04 OrthoFinder output from all 47 species
LOC_Os03g18380.3 ATUBA2, UBA 2,... ubiquitin-activating E1 protein 0.02 OrthoFinder output from all 47 species
LOC_Os07g49230.1 UBA1, MOS5,... ubiquitin-activating E1 protein 0.03 OrthoFinder output from all 47 species
LOC_Os11g01510.2 UBA1, MOS5,... ubiquitin-activating E1 protein 0.03 OrthoFinder output from all 47 species
MA_10436758g0010 UBA1, MOS5, ATUBA1 Ubiquitin-activating enzyme E1 2 OS=Triticum aestivum... 0.03 OrthoFinder output from all 47 species
Mp4g15300.1 ATUBA2, UBA 2 ubiquitin-activating E1 protein 0.05 OrthoFinder output from all 47 species
Mp7g08080.1 UBA1, MOS5, ATUBA1 ubiquitin-activating E1 protein 0.07 OrthoFinder output from all 47 species
Msp_g36423 UBA1, MOS5, ATUBA1 E1 ubiquitin-activating enzyme & original description: none 0.03 OrthoFinder output from all 47 species
Ore_g06607 UBA1, MOS5, ATUBA1 not classified & original description: none 0.02 OrthoFinder output from all 47 species
Ore_g27854 UBA1, MOS5, ATUBA1 E1 ubiquitin-activating enzyme & original description: none 0.04 OrthoFinder output from all 47 species
Smo145914 UBA1, MOS5, ATUBA1 Protein degradation.peptide tagging.Ubiquitin... 0.02 OrthoFinder output from all 47 species
Smo179776 UBA1, MOS5, ATUBA1 Protein degradation.peptide tagging.Ubiquitin... 0.03 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
MF GO:0008641 ubiquitin-like modifier activating enzyme activity IEA Interproscan
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Type GO Term Name Evidence Source
MF GO:0000166 nucleotide binding IEP HCCA
MF GO:0003924 GTPase activity IEP HCCA
MF GO:0005198 structural molecule activity IEP HCCA
MF GO:0005488 binding IEP HCCA
BP GO:0006810 transport IEP HCCA
BP GO:0006886 intracellular protein transport IEP HCCA
BP GO:0008104 protein localization IEP HCCA
BP GO:0015031 protein transport IEP HCCA
BP GO:0016192 vesicle-mediated transport IEP HCCA
MF GO:0017076 purine nucleotide binding IEP HCCA
CC GO:0030117 membrane coat IEP HCCA
CC GO:0030120 vesicle coat IEP HCCA
CC GO:0030126 COPI vesicle coat IEP HCCA
MF GO:0032553 ribonucleotide binding IEP HCCA
MF GO:0032555 purine ribonucleotide binding IEP HCCA
CC GO:0032991 protein-containing complex IEP HCCA
BP GO:0033036 macromolecule localization IEP HCCA
MF GO:0035639 purine ribonucleoside triphosphate binding IEP HCCA
MF GO:0036094 small molecule binding IEP HCCA
MF GO:0043168 anion binding IEP HCCA
BP GO:0045184 establishment of protein localization IEP HCCA
BP GO:0046907 intracellular transport IEP HCCA
BP GO:0051179 localization IEP HCCA
BP GO:0051234 establishment of localization IEP HCCA
BP GO:0051641 cellular localization IEP HCCA
BP GO:0051649 establishment of localization in cell IEP HCCA
BP GO:0070727 cellular macromolecule localization IEP HCCA
BP GO:0071702 organic substance transport IEP HCCA
BP GO:0071705 nitrogen compound transport IEP HCCA
MF GO:0097367 carbohydrate derivative binding IEP HCCA
CC GO:0098796 membrane protein complex IEP HCCA
MF GO:1901265 nucleoside phosphate binding IEP HCCA
InterPro domains Description Start Stop
IPR018965 Ub-activating_enz_E1_C 957 1046
IPR019572 UBA_E1_SCCH 633 886
IPR000594 ThiF_NAD_FAD-bd 50 428
IPR032420 E1_4HB 295 364
IPR000594 ThiF_NAD_FAD-bd 447 948
IPR032418 E1_FCCH 223 293
No external refs found!