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Aliases : Zm00001e039004
Description : no hits & (original description: none)
Gene families : OG0001992 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0001992_tree
Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.
| Type | Description | Actions |
|---|---|---|
| Neighborhood | HRR: Zm00001e039004_P001 | |
| Cluster | HCCA: Cluster_137 |
| Target | Alias | Description | ECC score | Gene Family Method | Actions |
|---|---|---|---|---|---|
| Adi_g109854 | No alias | not classified & original description: none | 0.02 | OrthoFinder output from all 47 species | |
| Aob_g00964 | No alias | not classified & original description: none | 0.02 | OrthoFinder output from all 47 species | |
| Cba_g19310 | No alias | not classified & original description: none | 0.02 | OrthoFinder output from all 47 species | |
| Ceric.02G011000.1 | ATSGS3, SGS3,... | not classified & original description: pacid=50585235... | 0.02 | OrthoFinder output from all 47 species | |
| Ceric.21G076600.1 | Ceric.21G076600 | not classified & original description: pacid=50603568... | 0.04 | OrthoFinder output from all 47 species | |
| Dcu_g07743 | No alias | not classified & original description: none | 0.02 | OrthoFinder output from all 47 species | |
| Gb_30397 | No alias | no hits & (original description: none) | 0.02 | OrthoFinder output from all 47 species | |
| LOC_Os03g06340.1 | LOC_Os03g06340 | no hits & (original description: none) | 0.05 | OrthoFinder output from all 47 species | |
| MA_115418g0010 | ATSGS3, SGS3 | no hits & (original description: none) | 0.03 | OrthoFinder output from all 47 species | |
| Msp_g15590 | No alias | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Ore_g16342 | No alias | not classified & original description: none | 0.02 | OrthoFinder output from all 47 species | |
| Pir_g26912 | ATSGS3, SGS3 | not classified & original description: none | 0.04 | OrthoFinder output from all 47 species | |
| Pnu_g19560 | No alias | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Sam_g36101 | No alias | not classified & original description: none | 0.02 | OrthoFinder output from all 47 species | |
| Solyc11g066990.2.1 | Solyc11g066990 | no hits & (original description: none) | 0.02 | OrthoFinder output from all 47 species | |
| Tin_g01224 | No alias | not classified & original description: none | 0.02 | OrthoFinder output from all 47 species |
| Type | GO Term | Name | Evidence | Source |
|---|---|---|---|---|
| BP | GO:0031047 | RNA-mediated gene silencing | IEA | Interproscan |
| Type | GO Term | Name | Evidence | Source |
|---|---|---|---|---|
| BP | GO:0000075 | cell cycle checkpoint signaling | IEP | HCCA |
| BP | GO:0000077 | DNA damage checkpoint signaling | IEP | HCCA |
| MF | GO:0004518 | nuclease activity | IEP | HCCA |
| MF | GO:0004519 | endonuclease activity | IEP | HCCA |
| MF | GO:0004521 | endoribonuclease activity | IEP | HCCA |
| MF | GO:0004525 | ribonuclease III activity | IEP | HCCA |
| MF | GO:0004540 | ribonuclease activity | IEP | HCCA |
| CC | GO:0005667 | transcription regulator complex | IEP | HCCA |
| BP | GO:0006139 | nucleobase-containing compound metabolic process | IEP | HCCA |
| BP | GO:0006396 | RNA processing | IEP | HCCA |
| BP | GO:0006725 | cellular aromatic compound metabolic process | IEP | HCCA |
| BP | GO:0006974 | cellular response to DNA damage stimulus | IEP | HCCA |
| BP | GO:0007165 | signal transduction | IEP | HCCA |
| BP | GO:0010564 | regulation of cell cycle process | IEP | HCCA |
| BP | GO:0010948 | negative regulation of cell cycle process | IEP | HCCA |
| BP | GO:0016070 | RNA metabolic process | IEP | HCCA |
| MF | GO:0016891 | endoribonuclease activity, producing 5'-phosphomonoesters | IEP | HCCA |
| MF | GO:0016893 | endonuclease activity, active with either ribo- or deoxyribonucleic acids and producing 5'-phosphomonoesters | IEP | HCCA |
| CC | GO:0017053 | transcription repressor complex | IEP | HCCA |
| CC | GO:0030896 | checkpoint clamp complex | IEP | HCCA |
| BP | GO:0031570 | DNA integrity checkpoint signaling | IEP | HCCA |
| MF | GO:0032296 | double-stranded RNA-specific ribonuclease activity | IEP | HCCA |
| CC | GO:0032991 | protein-containing complex | IEP | HCCA |
| BP | GO:0033554 | cellular response to stress | IEP | HCCA |
| BP | GO:0034641 | cellular nitrogen compound metabolic process | IEP | HCCA |
| BP | GO:0035556 | intracellular signal transduction | IEP | HCCA |
| BP | GO:0042770 | signal transduction in response to DNA damage | IEP | HCCA |
| BP | GO:0045786 | negative regulation of cell cycle | IEP | HCCA |
| BP | GO:0046483 | heterocycle metabolic process | IEP | HCCA |
| BP | GO:0048523 | negative regulation of cellular process | IEP | HCCA |
| BP | GO:0051716 | cellular response to stimulus | IEP | HCCA |
| BP | GO:0051726 | regulation of cell cycle | IEP | HCCA |
| BP | GO:0090304 | nucleic acid metabolic process | IEP | HCCA |
| MF | GO:0140098 | catalytic activity, acting on RNA | IEP | HCCA |
| CC | GO:0140513 | nuclear protein-containing complex | IEP | HCCA |
| BP | GO:1901360 | organic cyclic compound metabolic process | IEP | HCCA |
| BP | GO:1901987 | regulation of cell cycle phase transition | IEP | HCCA |
| BP | GO:1901988 | negative regulation of cell cycle phase transition | IEP | HCCA |
| InterPro domains | Description | Start | Stop |
|---|---|---|---|
| IPR005380 | XS_domain | 305 | 437 |
| No external refs found! |