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  5. Zm00001e038935_P001

Zm00001e038935_P001 (Zm00001e038935)


Aliases : Zm00001e038935

Description : no hits & (original description: none)


Gene families : OG0011300 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0011300_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Zm00001e038935_P001
Cluster HCCA: Cluster_133

Target Alias Description ECC score Gene Family Method Actions
AT5G42290 No alias transcription activator-related 0.11 OrthoFinder output from all 47 species
Azfi_s0027.g023560 No alias not classified & original description: CDS=1-438 0.04 OrthoFinder output from all 47 species
Ceric.31G070000.1 Ceric.31G070000 not classified & original description: pacid=50574404... 0.04 OrthoFinder output from all 47 species
LOC_Os03g04080.1 LOC_Os03g04080 no hits & (original description: none) 0.22 OrthoFinder output from all 47 species
MA_548946g0010 No alias no hits & (original description: none) 0.03 OrthoFinder output from all 47 species
Msp_g21526 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Msp_g27372 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Pp3c20_23510V3.1 Pp3c20_23510 transcription activator-related 0.01 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
MF GO:0003700 DNA-binding transcription factor activity IEP HCCA
BP GO:0006355 regulation of DNA-templated transcription IEP HCCA
BP GO:0009889 regulation of biosynthetic process IEP HCCA
BP GO:0010468 regulation of gene expression IEP HCCA
BP GO:0010556 regulation of macromolecule biosynthetic process IEP HCCA
BP GO:0019219 regulation of nucleobase-containing compound metabolic process IEP HCCA
BP GO:0019222 regulation of metabolic process IEP HCCA
BP GO:0031323 regulation of cellular metabolic process IEP HCCA
BP GO:0031326 regulation of cellular biosynthetic process IEP HCCA
BP GO:0051171 regulation of nitrogen compound metabolic process IEP HCCA
BP GO:0051252 regulation of RNA metabolic process IEP HCCA
BP GO:0060255 regulation of macromolecule metabolic process IEP HCCA
BP GO:0080090 regulation of primary metabolic process IEP HCCA
MF GO:0140110 transcription regulator activity IEP HCCA
BP GO:1903506 regulation of nucleic acid-templated transcription IEP HCCA
BP GO:2001141 regulation of RNA biosynthetic process IEP HCCA

No InterPro domains available for this sequence

No external refs found!