1. Home
  2. Species
  3. Zea mays
  4. Sequence
  5. Zm00001e038690_P002

Zm00001e038690_P002 (NUP155, Zm00001e038690)


Aliases : NUP155, Zm00001e038690

Description : NUP155 scaffold nucleoporin of nuclear pore complex


Gene families : OG0004159 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0004159_tree

Sequence : coding (download), protein (download)


Download

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Zm00001e038690_P002
Cluster HCCA: Cluster_15

Target Alias Description ECC score Gene Family Method Actions
AT1G14850 NUP155 nucleoporin 155 0.07 OrthoFinder output from all 47 species
Adi_g087243 NUP155 scaffold nucleoporin of nuclear pore complex *(NUP155) &... 0.02 OrthoFinder output from all 47 species
Ala_g08015 NUP155 scaffold nucleoporin of nuclear pore complex *(NUP155) &... 0.02 OrthoFinder output from all 47 species
Als_g01209 NUP155 scaffold nucleoporin of nuclear pore complex *(NUP155) &... 0.02 OrthoFinder output from all 47 species
Aop_g13988 NUP155 scaffold nucleoporin of nuclear pore complex *(NUP155) &... 0.03 OrthoFinder output from all 47 species
Aspi01Gene68733.t1 NUP155, Aspi01Gene68733 scaffold nucleoporin of nuclear pore complex *(NUP155) &... 0.02 OrthoFinder output from all 47 species
Azfi_s0010.g012176 NUP155 scaffold nucleoporin of nuclear pore complex *(NUP155) &... 0.04 OrthoFinder output from all 47 species
Ceric.28G038900.1 NUP155, Ceric.28G038900 scaffold nucleoporin of nuclear pore complex *(NUP155) &... 0.06 OrthoFinder output from all 47 species
Cpa|evm.model.tig00000789.44 NUP155 Protein translocation.nucleus.nucleocytoplasmic... 0.01 OrthoFinder output from all 47 species
Cre09.g394350 NUP155 Protein translocation.nucleus.nucleocytoplasmic... 0.04 OrthoFinder output from all 47 species
Dac_g15658 NUP155 scaffold nucleoporin of nuclear pore complex *(NUP155) &... 0.02 OrthoFinder output from all 47 species
Dde_g13741 NUP155 scaffold nucleoporin of nuclear pore complex *(NUP155) &... 0.02 OrthoFinder output from all 47 species
GSVIVT01011661001 NUP155 Protein translocation.nucleus.nucleocytoplasmic... 0.08 OrthoFinder output from all 47 species
GSVIVT01011662001 NUP155 Protein translocation.nucleus.nucleocytoplasmic... 0.05 OrthoFinder output from all 47 species
Gb_24664 NUP155 NUP155 scaffold nucleoporin of nuclear pore complex 0.06 OrthoFinder output from all 47 species
LOC_Os06g20090.1 NUP155, LOC_Os06g20090 NUP155 scaffold nucleoporin of nuclear pore complex 0.1 OrthoFinder output from all 47 species
Len_g04846 NUP155 scaffold nucleoporin of nuclear pore complex *(NUP155) &... 0.02 OrthoFinder output from all 47 species
Mp6g03580.1 NUP155 NUP155 scaffold nucleoporin of nuclear pore complex 0.04 OrthoFinder output from all 47 species
Nbi_g06825 NUP155 scaffold nucleoporin of nuclear pore complex *(NUP155) &... 0.02 OrthoFinder output from all 47 species
Sam_g52348 No alias scaffold nucleoporin of nuclear pore complex *(NUP155) &... 0.02 OrthoFinder output from all 47 species
Solyc07g008160.3.1 NUP155, Solyc07g008160 NUP155 scaffold nucleoporin of nuclear pore complex 0.06 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source

No GO annotation available for this sequence
Toggle parental
Type GO Term Name Evidence Source
CC GO:0000151 ubiquitin ligase complex IEP HCCA
CC GO:0000152 nuclear ubiquitin ligase complex IEP HCCA
MF GO:0000166 nucleotide binding IEP HCCA
BP GO:0000723 telomere maintenance IEP HCCA
MF GO:0003674 molecular_function IEP HCCA
MF GO:0003676 nucleic acid binding IEP HCCA
MF GO:0003677 DNA binding IEP HCCA
MF GO:0003678 DNA helicase activity IEP HCCA
MF GO:0003682 chromatin binding IEP HCCA
MF GO:0003824 catalytic activity IEP HCCA
MF GO:0003887 DNA-directed DNA polymerase activity IEP HCCA
MF GO:0004386 helicase activity IEP HCCA
MF GO:0004518 nuclease activity IEP HCCA
MF GO:0004519 endonuclease activity IEP HCCA
MF GO:0004521 endoribonuclease activity IEP HCCA
MF GO:0004525 ribonuclease III activity IEP HCCA
MF GO:0004540 ribonuclease activity IEP HCCA
MF GO:0005488 binding IEP HCCA
MF GO:0005515 protein binding IEP HCCA
MF GO:0005524 ATP binding IEP HCCA
CC GO:0005575 cellular_component IEP HCCA
CC GO:0005634 nucleus IEP HCCA
CC GO:0005680 anaphase-promoting complex IEP HCCA
BP GO:0006139 nucleobase-containing compound metabolic process IEP HCCA
BP GO:0006259 DNA metabolic process IEP HCCA
BP GO:0006260 DNA replication IEP HCCA
BP GO:0006725 cellular aromatic compound metabolic process IEP HCCA
BP GO:0006807 nitrogen compound metabolic process IEP HCCA
BP GO:0006996 organelle organization IEP HCCA
MF GO:0008094 ATP-dependent activity, acting on DNA IEP HCCA
BP GO:0008150 biological_process IEP HCCA
BP GO:0008152 metabolic process IEP HCCA
BP GO:0009987 cellular process IEP HCCA
MF GO:0016740 transferase activity IEP HCCA
MF GO:0016772 transferase activity, transferring phosphorus-containing groups IEP HCCA
MF GO:0016779 nucleotidyltransferase activity IEP HCCA
MF GO:0016891 endoribonuclease activity, producing 5'-phosphomonoesters IEP HCCA
MF GO:0016893 endonuclease activity, active with either ribo- or deoxyribonucleic acids and producing 5'-phosphomonoesters IEP HCCA
MF GO:0017076 purine nucleotide binding IEP HCCA
MF GO:0030554 adenyl nucleotide binding IEP HCCA
CC GO:0031461 cullin-RING ubiquitin ligase complex IEP HCCA
BP GO:0032200 telomere organization IEP HCCA
MF GO:0032296 double-stranded RNA-specific ribonuclease activity IEP HCCA
MF GO:0032553 ribonucleotide binding IEP HCCA
MF GO:0032555 purine ribonucleotide binding IEP HCCA
MF GO:0032559 adenyl ribonucleotide binding IEP HCCA
MF GO:0034061 DNA polymerase activity IEP HCCA
BP GO:0034641 cellular nitrogen compound metabolic process IEP HCCA
MF GO:0035639 purine ribonucleoside triphosphate binding IEP HCCA
MF GO:0036094 small molecule binding IEP HCCA
MF GO:0043167 ion binding IEP HCCA
MF GO:0043168 anion binding IEP HCCA
BP GO:0043170 macromolecule metabolic process IEP HCCA
CC GO:0043226 organelle IEP HCCA
CC GO:0043227 membrane-bounded organelle IEP HCCA
CC GO:0043229 intracellular organelle IEP HCCA
CC GO:0043231 intracellular membrane-bounded organelle IEP HCCA
BP GO:0044237 cellular metabolic process IEP HCCA
BP GO:0044238 primary metabolic process IEP HCCA
BP GO:0044260 cellular macromolecule metabolic process IEP HCCA
BP GO:0046483 heterocycle metabolic process IEP HCCA
BP GO:0051276 chromosome organization IEP HCCA
BP GO:0071704 organic substance metabolic process IEP HCCA
BP GO:0090304 nucleic acid metabolic process IEP HCCA
MF GO:0097159 organic cyclic compound binding IEP HCCA
MF GO:0097367 carbohydrate derivative binding IEP HCCA
CC GO:0110165 cellular anatomical entity IEP HCCA
MF GO:0140097 catalytic activity, acting on DNA IEP HCCA
CC GO:0140513 nuclear protein-containing complex IEP HCCA
CC GO:0140535 intracellular protein-containing complex IEP HCCA
MF GO:0140640 catalytic activity, acting on a nucleic acid IEP HCCA
MF GO:1901265 nucleoside phosphate binding IEP HCCA
BP GO:1901360 organic cyclic compound metabolic process IEP HCCA
MF GO:1901363 heterocyclic compound binding IEP HCCA
CC GO:1990234 transferase complex IEP HCCA
InterPro domains Description Start Stop
IPR014908 Nucleoporin_Nup133/Nup155_N 55 500
No external refs found!