Zm00001e038429_P001 (LBD11, Zm00001e038429)


Aliases : LBD11, Zm00001e038429

Description : transcription factor (AS2/LOB)


Gene families : OG0000114 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000114_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Zm00001e038429_P001

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00007p00227160 LBD15, ASL11,... RNA biosynthesis.transcriptional activation.AS2/LOB... 0.03 OrthoFinder output from all 47 species
AMTR_s00080p00153120 LBD1,... RNA biosynthesis.transcriptional activation.AS2/LOB... 0.06 OrthoFinder output from all 47 species
AMTR_s00153p00034160 LBD22,... RNA biosynthesis.transcriptional activation.AS2/LOB... 0.04 OrthoFinder output from all 47 species
AT1G06280 LBD2 LOB domain-containing protein 2 0.02 OrthoFinder output from all 47 species
AT1G07900 LBD1 LOB domain-containing protein 1 0.03 OrthoFinder output from all 47 species
AT1G65620 AS2 Lateral organ boundaries (LOB) domain family protein 0.02 OrthoFinder output from all 47 species
AT2G28500 LBD11 LOB domain-containing protein 11 0.04 OrthoFinder output from all 47 species
AT2G30340 LBD13 LOB domain-containing protein 13 0.02 OrthoFinder output from all 47 species
AT2G40470 LBD15, ASL11 LOB domain-containing protein 15 0.02 OrthoFinder output from all 47 species
AT2G42430 LBD16, ASL18 lateral organ boundaries-domain 16 0.04 OrthoFinder output from all 47 species
AT2G42440 No alias Lateral organ boundaries (LOB) domain family protein 0.03 OrthoFinder output from all 47 species
AT4G00220 LBD30, JLO Lateral organ boundaries (LOB) domain family protein 0.03 OrthoFinder output from all 47 species
Aev_g41387 LBD4 AS2/LOB-type transcription factor & original description: none 0.03 OrthoFinder output from all 47 species
Aob_g13722 LOB AS2/LOB-type transcription factor & original description: none 0.03 OrthoFinder output from all 47 species
Aob_g23864 LBD15, ASL11 AS2/LOB-type transcription factor & original description: none 0.02 OrthoFinder output from all 47 species
Aop_g58526 LBD15, ASL11 AS2/LOB-type transcription factor & original description: none 0.02 OrthoFinder output from all 47 species
Aop_g64401 LBD20 AS2/LOB-type transcription factor & original description: none 0.03 OrthoFinder output from all 47 species
Aop_g68741 LBD22 AS2/LOB-type transcription factor & original description: none 0.03 OrthoFinder output from all 47 species
Aspi01Gene43917.t1 LBD15, ASL11,... AS2/LOB-type transcription factor & original description: none 0.03 OrthoFinder output from all 47 species
Ceric.38G014600.1 LOB, Ceric.38G014600 AS2/LOB-type transcription factor & original... 0.02 OrthoFinder output from all 47 species
Dac_g06666 LOB AS2/LOB-type transcription factor & original description: none 0.02 OrthoFinder output from all 47 species
GSVIVT01003547001 No alias RNA biosynthesis.transcriptional activation.AS2/LOB... 0.02 OrthoFinder output from all 47 species
GSVIVT01003548001 ASL1, LBD36 RNA biosynthesis.transcriptional activation.AS2/LOB... 0.03 OrthoFinder output from all 47 species
GSVIVT01010625001 LBD23 RNA biosynthesis.transcriptional activation.AS2/LOB... 0.03 OrthoFinder output from all 47 species
GSVIVT01013631001 LBD4 RNA biosynthesis.transcriptional activation.AS2/LOB... 0.04 OrthoFinder output from all 47 species
GSVIVT01016330001 LBD11 RNA biosynthesis.transcriptional activation.AS2/LOB... 0.04 OrthoFinder output from all 47 species
GSVIVT01016333001 LBD11 RNA biosynthesis.transcriptional activation.AS2/LOB... 0.03 OrthoFinder output from all 47 species
GSVIVT01016335001 LBD11 RNA biosynthesis.transcriptional activation.AS2/LOB... 0.08 OrthoFinder output from all 47 species
GSVIVT01025128001 No alias RNA biosynthesis.transcriptional activation.AS2/LOB... 0.03 OrthoFinder output from all 47 species
GSVIVT01028294001 LBD29, ASL16 RNA biosynthesis.transcriptional activation.AS2/LOB... 0.06 OrthoFinder output from all 47 species
GSVIVT01032714001 LBD15, ASL11 RNA biosynthesis.transcriptional activation.AS2/LOB... 0.03 OrthoFinder output from all 47 species
GSVIVT01032752001 No alias RNA biosynthesis.transcriptional activation.AS2/LOB... 0.04 OrthoFinder output from all 47 species
Gb_08465 LBD4 transcription factor (AS2/LOB) 0.06 OrthoFinder output from all 47 species
Gb_16914 LBD1 transcription factor (AS2/LOB) 0.03 OrthoFinder output from all 47 species
Gb_19383 LBD11 transcription factor (AS2/LOB) 0.06 OrthoFinder output from all 47 species
Gb_19390 LBD4 transcription factor (AS2/LOB) 0.05 OrthoFinder output from all 47 species
Gb_22180 LBD11 transcription factor (AS2/LOB) 0.03 OrthoFinder output from all 47 species
Gb_23794 LBD12, ASL5, PCK1 transcription factor (AS2/LOB) 0.03 OrthoFinder output from all 47 species
Gb_40684 LBD11 transcription factor (AS2/LOB) 0.03 OrthoFinder output from all 47 species
Gb_40685 LBD11 transcription factor (AS2/LOB) 0.03 OrthoFinder output from all 47 species
LOC_Os02g57490.1 LBD16, ASL18,... transcription factor (AS2/LOB) 0.04 OrthoFinder output from all 47 species
LOC_Os03g05500.1 LBD29, ASL16,... transcription factor (AS2/LOB) 0.03 OrthoFinder output from all 47 species
LOC_Os03g05510.1 LBD29, ASL16,... transcription factor (AS2/LOB) 0.06 OrthoFinder output from all 47 species
LOC_Os03g14270.1 LBD18, LOC_Os03g14270 transcription factor (AS2/LOB) 0.03 OrthoFinder output from all 47 species
LOC_Os03g17810.1 LBD11, LOC_Os03g17810 transcription factor (AS2/LOB) 0.02 OrthoFinder output from all 47 species
Len_g55694 LBD20 AS2/LOB-type transcription factor & original description: none 0.03 OrthoFinder output from all 47 species
MA_10430986g0010 LBD15, ASL11 transcription factor (AS2/LOB) 0.06 OrthoFinder output from all 47 species
MA_10432553g0010 LBD12, ASL5, PCK1 transcription factor (AS2/LOB) 0.03 OrthoFinder output from all 47 species
MA_16891g0010 LOB transcription factor (AS2/LOB) 0.05 OrthoFinder output from all 47 species
MA_292200g0010 LBD11 transcription factor (AS2/LOB) 0.02 OrthoFinder output from all 47 species
MA_88711g0010 LBD25 transcription factor (AS2/LOB) 0.02 OrthoFinder output from all 47 species
Pir_g30887 LBD4 AS2/LOB-type transcription factor & original description: none 0.04 OrthoFinder output from all 47 species
Pnu_g00307 AS2 AS2/LOB-type transcription factor & original description: none 0.03 OrthoFinder output from all 47 species
Ppi_g16452 LBD15, ASL11 AS2/LOB-type transcription factor & original description: none 0.03 OrthoFinder output from all 47 species
Ppi_g17986 LOB AS2/LOB-type transcription factor & original description: none 0.03 OrthoFinder output from all 47 species
Ppi_g19686 LBD4 AS2/LOB-type transcription factor & original description: none 0.02 OrthoFinder output from all 47 species
Ppi_g31655 LBD4 AS2/LOB-type transcription factor & original description: none 0.03 OrthoFinder output from all 47 species
Smo69621 AS2 RNA biosynthesis.transcriptional activation.AS2/LOB... 0.03 OrthoFinder output from all 47 species
Solyc02g069440.3.1 LBD4, Solyc02g069440 transcription factor (AS2/LOB) 0.04 OrthoFinder output from all 47 species
Solyc06g005090.3.1 LBD11, Solyc06g005090 transcription factor (AS2/LOB) 0.06 OrthoFinder output from all 47 species
Solyc06g071660.3.1 LOB, Solyc06g071660 transcription factor (AS2/LOB) 0.04 OrthoFinder output from all 47 species
Solyc11g045530.3.1 LBD4, Solyc11g045530 transcription factor (AS2/LOB) 0.03 OrthoFinder output from all 47 species
Solyc11g072470.3.1 LBD1, Solyc11g072470 transcription factor (AS2/LOB) 0.03 OrthoFinder output from all 47 species
Zm00001e000391_P001 LBD29, ASL16,... transcription factor (AS2/LOB) 0.03 OrthoFinder output from all 47 species
Zm00001e001031_P001 LBD18, Zm00001e001031 transcription factor (AS2/LOB) 0.02 OrthoFinder output from all 47 species
Zm00001e019424_P001 LBD15, ASL11,... transcription factor (AS2/LOB) 0.03 OrthoFinder output from all 47 species
Zm00001e019686_P001 LBD20, Zm00001e019686 transcription factor (AS2/LOB) 0.03 OrthoFinder output from all 47 species
Zm00001e026736_P001 LBD15, ASL11,... transcription factor (AS2/LOB) 0.02 OrthoFinder output from all 47 species
Zm00001e030195_P001 LBD2, Zm00001e030195 transcription factor (AS2/LOB) 0.02 OrthoFinder output from all 47 species
Zm00001e031510_P001 LBD12, ASL5,... transcription factor (AS2/LOB) 0.03 OrthoFinder output from all 47 species
Zm00001e042347_P001 LBD29, ASL16,... transcription factor (AS2/LOB) 0.03 OrthoFinder output from all 47 species
Zm00001e042443_P001 LBD29, ASL16,... transcription factor (AS2/LOB) 0.03 OrthoFinder output from all 47 species
Zm00001e042448_P001 LBD29, ASL16,... transcription factor (AS2/LOB) 0.03 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source

No GO annotation available for this sequence

Type GO Term Name Evidence Source
MF GO:0004857 enzyme inhibitor activity IEP HCCA
MF GO:0004866 endopeptidase inhibitor activity IEP HCCA
MF GO:0004867 serine-type endopeptidase inhibitor activity IEP HCCA
MF GO:0004869 cysteine-type endopeptidase inhibitor activity IEP HCCA
BP GO:0009611 response to wounding IEP HCCA
MF GO:0016747 acyltransferase activity, transferring groups other than amino-acyl groups IEP HCCA
MF GO:0030234 enzyme regulator activity IEP HCCA
MF GO:0030414 peptidase inhibitor activity IEP HCCA
MF GO:0061134 peptidase regulator activity IEP HCCA
MF GO:0061135 endopeptidase regulator activity IEP HCCA
MF GO:0098772 molecular function regulator activity IEP HCCA
MF GO:0140678 molecular function inhibitor activity IEP HCCA
InterPro domains Description Start Stop
IPR004883 LOB 64 161
No external refs found!