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  5. Zm00001e037970_P002

Zm00001e037970_P002 (Zm00001e037970)


Aliases : Zm00001e037970

Description : LNK circadian clock transcriptional co-activator


Gene families : OG0004622 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0004622_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Zm00001e037970_P002
Cluster HCCA: Cluster_127

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00101p00159320 evm_27.TU.AmTr_v1... No description available 0.04 OrthoFinder output from all 47 species
AT3G12320 No alias unknown protein; BEST Arabidopsis thaliana protein match... 0.12 OrthoFinder output from all 47 species
AT5G06980 No alias unknown protein; BEST Arabidopsis thaliana protein match... 0.06 OrthoFinder output from all 47 species
Adi_g074130 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Als_g15342 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species
Als_g46675 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Aspi01Gene41495.t1 Aspi01Gene41495 not classified & original description: none 0.02 OrthoFinder output from all 47 species
Ceric.21G053400.1 Ceric.21G053400 not classified & original description: pacid=50603518... 0.07 OrthoFinder output from all 47 species
GSVIVT01036604001 No alias No description available 0.07 OrthoFinder output from all 47 species
LOC_Os01g17396.2 LOC_Os01g17396 no hits & (original description: none) 0.06 OrthoFinder output from all 47 species
Mp4g19240.1 No alias no hits & (original description: none) 0.02 OrthoFinder output from all 47 species
Pnu_g18301 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Solyc01g096630.3.1 Solyc01g096630 no hits & (original description: none) 0.11 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
MF GO:0004014 adenosylmethionine decarboxylase activity IEP HCCA
BP GO:0006576 biogenic amine metabolic process IEP HCCA
BP GO:0006595 polyamine metabolic process IEP HCCA
BP GO:0006596 polyamine biosynthetic process IEP HCCA
BP GO:0006597 spermine biosynthetic process IEP HCCA
BP GO:0007165 signal transduction IEP HCCA
BP GO:0008215 spermine metabolic process IEP HCCA
BP GO:0008216 spermidine metabolic process IEP HCCA
MF GO:0008270 zinc ion binding IEP HCCA
BP GO:0008295 spermidine biosynthetic process IEP HCCA
BP GO:0009308 amine metabolic process IEP HCCA
BP GO:0009309 amine biosynthetic process IEP HCCA
MF GO:0016829 lyase activity IEP HCCA
MF GO:0016830 carbon-carbon lyase activity IEP HCCA
MF GO:0016831 carboxy-lyase activity IEP HCCA
BP GO:0042401 biogenic amine biosynthetic process IEP HCCA
MF GO:0043169 cation binding IEP HCCA
MF GO:0046872 metal ion binding IEP HCCA
MF GO:0046914 transition metal ion binding IEP HCCA
BP GO:0050789 regulation of biological process IEP HCCA
BP GO:0050794 regulation of cellular process IEP HCCA
BP GO:0065007 biological regulation IEP HCCA

No InterPro domains available for this sequence

No external refs found!