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  5. Zm00001e036645_P004

Zm00001e036645_P004 (SLK2, Zm00001e036645)


Aliases : SLK2, Zm00001e036645

Description : Probable transcriptional regulator SLK2 OS=Arabidopsis thaliana (sp|q94bp0|slk2_arath : 331.0)


Gene families : OG0000747 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000747_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Zm00001e036645_P004
Cluster HCCA: Cluster_13

Target Alias Description ECC score Gene Family Method Actions
Als_g09893 SEU adapter component *(SEU/SLK) of transcriptional... 0.02 OrthoFinder output from all 47 species
Als_g11136 SEU adapter component *(SEU/SLK) of transcriptional... 0.02 OrthoFinder output from all 47 species
Aspi01Gene51629.t1 SEU, Aspi01Gene51629 adapter component *(SEU/SLK) of transcriptional... 0.03 OrthoFinder output from all 47 species
Aspi01Gene69099.t1 SEU, Aspi01Gene69099 adapter component *(SEU/SLK) of transcriptional... 0.02 OrthoFinder output from all 47 species
Ceric.03G041400.1 SEU, Ceric.03G041400 adapter component *(SEU/SLK) of transcriptional... 0.02 OrthoFinder output from all 47 species
Nbi_g03852 SEU adapter component *(SEU/SLK) of transcriptional... 0.02 OrthoFinder output from all 47 species
Ore_g05688 SEU adapter component *(SEU/SLK) of transcriptional... 0.02 OrthoFinder output from all 47 species
Sam_g19598 No alias adapter component *(SEU/SLK) of transcriptional... 0.02 OrthoFinder output from all 47 species
Tin_g20497 SEU adapter component *(SEU/SLK) of transcriptional... 0.02 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
BP GO:0006351 DNA-templated transcription IEP HCCA
BP GO:0016070 RNA metabolic process IEP HCCA
BP GO:0018130 heterocycle biosynthetic process IEP HCCA
BP GO:0019438 aromatic compound biosynthetic process IEP HCCA
BP GO:0032774 RNA biosynthetic process IEP HCCA
BP GO:0034654 nucleobase-containing compound biosynthetic process IEP HCCA
MF GO:0043565 sequence-specific DNA binding IEP HCCA
BP GO:0097659 nucleic acid-templated transcription IEP HCCA
BP GO:1901362 organic cyclic compound biosynthetic process IEP HCCA
InterPro domains Description Start Stop
IPR029005 LIM-bd/SEUSS 230 489
No external refs found!