1. Home
  2. Species
  3. Zea mays
  4. Sequence
  5. Zm00001e036524_P002

Zm00001e036524_P002 (Zm00001e036524)


Aliases : Zm00001e036524

Description : subunit beta2 of coat protein complex


Gene families : OG0002111 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0002111_tree

Sequence : coding (download), protein (download)


Download

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Zm00001e036524_P002
Cluster HCCA: Cluster_151

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00142p00013680 evm_27.TU.AmTr_v1... Vesicle trafficking.Coat protein I (COPI) coatomer... 0.03 OrthoFinder output from all 47 species
AT1G79990 No alias structural molecules 0.08 OrthoFinder output from all 47 species
AT3G15980 No alias Coatomer, beta' subunit 0.1 OrthoFinder output from all 47 species
Adi_g088099 No alias subunit beta2 of coat protein complex & original... 0.03 OrthoFinder output from all 47 species
Aev_g13025 No alias subunit beta2 of coat protein complex & original... 0.03 OrthoFinder output from all 47 species
Ala_g02602 No alias subunit beta2 of coat protein complex & original... 0.08 OrthoFinder output from all 47 species
Als_g04780 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species
Als_g23306 No alias subunit beta2 of coat protein complex & original... 0.03 OrthoFinder output from all 47 species
Als_g23307 No alias subunit beta2 of coat protein complex & original... 0.03 OrthoFinder output from all 47 species
Aop_g12571 No alias subunit beta2 of coat protein complex & original... 0.02 OrthoFinder output from all 47 species
Azfi_s0001.g000608 No alias subunit beta2 of coat protein complex & original... 0.05 OrthoFinder output from all 47 species
Azfi_s0038.g026263 No alias subunit beta2 of coat protein complex & original... 0.04 OrthoFinder output from all 47 species
Cba_g14578 No alias subunit beta2 of coat protein complex & original... 0.02 OrthoFinder output from all 47 species
Cre02.g118500 No alias Vesicle trafficking.Coat protein I (COPI) coatomer... 0.03 OrthoFinder output from all 47 species
Dcu_g04083 No alias subunit beta2 of coat protein complex & original... 0.05 OrthoFinder output from all 47 species
Ehy_g02910 No alias subunit beta2 of coat protein complex & original... 0.02 OrthoFinder output from all 47 species
Ehy_g08641 No alias subunit beta2 of coat protein complex & original... 0.02 OrthoFinder output from all 47 species
GSVIVT01017121001 No alias Vesicle trafficking.Coat protein I (COPI) coatomer... 0.04 OrthoFinder output from all 47 species
Gb_26317 No alias subunit beta2 of coat protein complex 0.04 OrthoFinder output from all 47 species
LOC_Os02g11830.2 LOC_Os02g11830 subunit beta2 of coat protein complex 0.08 OrthoFinder output from all 47 species
LOC_Os02g11840.1 LOC_Os02g11840 subunit beta2 of coat protein complex 0.07 OrthoFinder output from all 47 species
LOC_Os06g05180.3 LOC_Os06g05180 Coatomer subunit beta-1 OS=Oryza sativa subsp. japonica... 0.09 OrthoFinder output from all 47 species
Len_g12266 No alias subunit beta2 of coat protein complex & original... 0.04 OrthoFinder output from all 47 species
Len_g46090 No alias subunit beta2 of coat protein complex & original... 0.04 OrthoFinder output from all 47 species
Mp3g04060.1 No alias subunit beta2 of coat protein complex 0.06 OrthoFinder output from all 47 species
Msp_g01672 No alias subunit beta2 of coat protein complex & original... 0.05 OrthoFinder output from all 47 species
Nbi_g07405 No alias subunit beta2 of coat protein complex & original... 0.04 OrthoFinder output from all 47 species
Ore_g10228 No alias subunit beta2 of coat protein complex & original... 0.03 OrthoFinder output from all 47 species
Pir_g14528 No alias subunit beta2 of coat protein complex & original... 0.03 OrthoFinder output from all 47 species
Pp3c2_1810V3.1 Pp3c2_1810 Coatomer, beta\ subunit 0.02 OrthoFinder output from all 47 species
Ppi_g01343 No alias subunit beta2 of coat protein complex & original... 0.03 OrthoFinder output from all 47 species
Solyc03g120270.4.1 Solyc03g120270 subunit beta2 of coat protein complex 0.06 OrthoFinder output from all 47 species
Solyc06g066730.3.1 Solyc06g066730 subunit beta2 of coat protein complex 0.04 OrthoFinder output from all 47 species
Solyc12g043000.3.1 Solyc12g043000 subunit beta2 of coat protein complex 0.06 OrthoFinder output from all 47 species
Spa_g10496 No alias subunit beta2 of coat protein complex & original... 0.04 OrthoFinder output from all 47 species
Spa_g17544 No alias subunit beta2 of coat protein complex & original... 0.07 OrthoFinder output from all 47 species
Spa_g50190 No alias subunit beta2 of coat protein complex & original... 0.03 OrthoFinder output from all 47 species
Tin_g02168 No alias subunit beta2 of coat protein complex & original... 0.02 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
MF GO:0005198 structural molecule activity IEA Interproscan
MF GO:0005515 protein binding IEA Interproscan
BP GO:0006886 intracellular protein transport IEA Interproscan
BP GO:0016192 vesicle-mediated transport IEA Interproscan
CC GO:0030117 membrane coat IEA Interproscan
Toggle parental
Type GO Term Name Evidence Source
MF GO:0005534 galactose binding IEP HCCA
BP GO:0006486 protein glycosylation IEP HCCA
BP GO:0006487 protein N-linked glycosylation IEP HCCA
CC GO:0008250 oligosaccharyltransferase complex IEP HCCA
MF GO:0030246 carbohydrate binding IEP HCCA
BP GO:0043413 macromolecule glycosylation IEP HCCA
MF GO:0048029 monosaccharide binding IEP HCCA
BP GO:0070085 glycosylation IEP HCCA
CC GO:0140534 endoplasmic reticulum protein-containing complex IEP HCCA
CC GO:1902494 catalytic complex IEP HCCA
CC GO:1990234 transferase complex IEP HCCA
InterPro domains Description Start Stop
IPR001680 WD40_repeat 177 215
IPR001680 WD40_repeat 91 127
IPR001680 WD40_repeat 133 171
IPR001680 WD40_repeat 220 256
IPR006692 Coatomer_WD-assoc_reg 319 763
No external refs found!