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  5. Zm00001e036159_P001

Zm00001e036159_P001 (AGL24, Zm00001e036159)


Aliases : AGL24, Zm00001e036159

Description : transcription factor (MADS/AGL)


Gene families : OG0000022 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): No tree available for this family

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Zm00001e036159_P001
Cluster HCCA: Cluster_51

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00001p00218870 ANR1, AGL44,... RNA biosynthesis.transcriptional activation.MADS box... 0.02 OrthoFinder output from all 47 species
AMTR_s00013p00114420 evm_27.TU.AmTr_v1... RNA biosynthesis.transcriptional activation.MADS box... 0.02 OrthoFinder output from all 47 species
AMTR_s00053p00228660 AGL15,... RNA biosynthesis.transcriptional activation.MADS box... 0.03 OrthoFinder output from all 47 species
AMTR_s00071p00198970 XAL1, AGL12,... RNA biosynthesis.transcriptional activation.MADS box... 0.02 OrthoFinder output from all 47 species
AMTR_s00089p00081270 PI,... RNA biosynthesis.transcriptional activation.MADS box... 0.02 OrthoFinder output from all 47 species
AMTR_s00109p00015260 evm_27.TU.AmTr_v1... RNA biosynthesis.transcriptional activation.MADS box... 0.03 OrthoFinder output from all 47 species
AT1G77950 AGL67 AGAMOUS-like 67 0.02 OrthoFinder output from all 47 species
AT2G03710 AGL3, SEP4 K-box region and MADS-box transcription factor family protein 0.06 OrthoFinder output from all 47 species
AT2G14210 ANR1, AGL44 AGAMOUS-like 44 0.04 OrthoFinder output from all 47 species
AT2G42830 SHP2, AGL5 K-box region and MADS-box transcription factor family protein 0.02 OrthoFinder output from all 47 species
AT2G45660 SOC1, AGL20, ATSOC1 AGAMOUS-like 20 0.08 OrthoFinder output from all 47 species
AT3G57390 AGL18 AGAMOUS-like 18 0.03 OrthoFinder output from all 47 species
AT4G24540 AGL24 AGAMOUS-like 24 0.05 OrthoFinder output from all 47 species
AT5G23260 AGL32, TT16, ABS K-box region and MADS-box transcription factor family protein 0.03 OrthoFinder output from all 47 species
Adi_g079998 AGL21 MADS/AGL-type transcription factor & original description: none 0.03 OrthoFinder output from all 47 species
Aev_g07052 AGL16 MADS/AGL-type transcription factor & original description: none 0.03 OrthoFinder output from all 47 species
Aev_g20345 AGL7, AP1 MADS/AGL-type transcription factor & original description: none 0.03 OrthoFinder output from all 47 species
Aev_g46452 AGL104 MADS/AGL-type transcription factor & original description: none 0.03 OrthoFinder output from all 47 species
Ala_g06575 GL19, AGL19 MADS/AGL-type transcription factor & original description: none 0.03 OrthoFinder output from all 47 species
Ala_g28240 SHP2, AGL5 MADS/AGL-type transcription factor & original description: none 0.02 OrthoFinder output from all 47 species
Als_g04197 SOC1, AGL20, ATSOC1 MADS/AGL-type transcription factor & original description: none 0.02 OrthoFinder output from all 47 species
Aob_g02910 AGL16 MADS/AGL-type transcription factor & original description: none 0.03 OrthoFinder output from all 47 species
Aob_g02975 SHP2, AGL5 MADS/AGL-type transcription factor & original description: none 0.04 OrthoFinder output from all 47 species
Aob_g19697 AGL16 MADS/AGL-type transcription factor & original description: none 0.07 OrthoFinder output from all 47 species
Aob_g42778 AGL2, SEP1 MADS/AGL-type transcription factor & original description: none 0.04 OrthoFinder output from all 47 species
Aspi01Gene13944.t1 AGL18, Aspi01Gene13944 MADS/AGL-type transcription factor & original description: none 0.04 OrthoFinder output from all 47 species
Aspi01Gene15809.t1 SHP2, AGL5,... MADS/AGL-type transcription factor & original description: none 0.02 OrthoFinder output from all 47 species
Aspi01Gene17774.t1 SHP2, AGL5,... MADS/AGL-type transcription factor & original description: none 0.02 OrthoFinder output from all 47 species
Aspi01Gene44552.t1 AGL13, Aspi01Gene44552 not classified & original description: none 0.02 OrthoFinder output from all 47 species
Aspi01Gene49762.t1 GL19, AGL19,... not classified & original description: none 0.02 OrthoFinder output from all 47 species
Aspi01Gene68989.t2 SOC1, AGL20,... MADS/AGL-type transcription factor & original description: none 0.03 OrthoFinder output from all 47 species
Cba_g23821 AGL16 MADS/AGL-type transcription factor & original description: none 0.02 OrthoFinder output from all 47 species
Cba_g25122 SHP2, AGL5 MADS/AGL-type transcription factor & original description: none 0.03 OrthoFinder output from all 47 species
Cba_g32938 SHP2, AGL5 MADS/AGL-type transcription factor & original description: none 0.04 OrthoFinder output from all 47 species
Cba_g33793 AGL14 MADS/AGL-type transcription factor & original description: none 0.02 OrthoFinder output from all 47 species
Cba_g38860 STK, AGL11 MADS/AGL-type transcription factor & original description: none 0.03 OrthoFinder output from all 47 species
Ceric.07G094900.1 AGL7, AP1,... MADS/AGL-type transcription factor & original... 0.05 OrthoFinder output from all 47 species
Ceric.23G035100.1 AGL18, Ceric.23G035100 MADS/AGL-type transcription factor & original... 0.03 OrthoFinder output from all 47 species
Ceric.34G033600.1 AGL16, Ceric.34G033600 MADS/AGL-type transcription factor & original... 0.03 OrthoFinder output from all 47 species
Cpa|evm.model.tig00000944.9 AGL15 RNA biosynthesis.transcriptional activation.MADS box... 0.01 OrthoFinder output from all 47 species
Dac_g08553 GL19, AGL19 MADS/AGL-type transcription factor & original description: none 0.02 OrthoFinder output from all 47 species
Dac_g20590 AGL30 MADS/AGL-type transcription factor & original description: none 0.03 OrthoFinder output from all 47 species
Dde_g14634 AGL7, AP1 MADS/AGL-type transcription factor & original description: none 0.02 OrthoFinder output from all 47 species
Dde_g18067 AGL21 MADS/AGL-type transcription factor & original description: none 0.03 OrthoFinder output from all 47 species
Dde_g46454 GL19, AGL19 MADS/AGL-type transcription factor & original description: none 0.02 OrthoFinder output from all 47 species
Ehy_g15929 AGL16 MADS/AGL-type transcription factor & original description: none 0.03 OrthoFinder output from all 47 species
GSVIVT01000802001 SHP2, AGL5 RNA biosynthesis.transcriptional activation.MADS box... 0.03 OrthoFinder output from all 47 species
GSVIVT01008140001 AGL8, FUL RNA biosynthesis.transcriptional activation.MADS box... 0.04 OrthoFinder output from all 47 species
GSVIVT01008560001 SOC1, AGL20, ATSOC1 RNA biosynthesis.transcriptional activation.MADS box... 0.06 OrthoFinder output from all 47 species
GSVIVT01010221001 AGL62 RNA biosynthesis.transcriptional activation.MADS box... 0.04 OrthoFinder output from all 47 species
GSVIVT01014093001 No alias RNA biosynthesis.transcriptional activation.MADS box... 0.04 OrthoFinder output from all 47 species
GSVIVT01019883001 GL19, AGL19 RNA biosynthesis.transcriptional activation.MADS box... 0.03 OrthoFinder output from all 47 species
GSVIVT01022182001 AGL104 RNA biosynthesis.transcriptional activation.MADS box... 0.04 OrthoFinder output from all 47 species
GSVIVT01025945001 STK, AGL11 RNA biosynthesis.transcriptional activation.MADS box... 0.04 OrthoFinder output from all 47 species
GSVIVT01026207001 AGL32, TT16, ABS RNA biosynthesis.transcriptional activation.MADS box... 0.03 OrthoFinder output from all 47 species
GSVIVT01035477001 AGL30 RNA biosynthesis.transcriptional activation.MADS box... 0.03 OrthoFinder output from all 47 species
Gb_03068 AGL16 transcription factor (MADS/AGL) 0.03 OrthoFinder output from all 47 species
Gb_03806 No alias no hits & (original description: none) 0.03 OrthoFinder output from all 47 species
Gb_15398 PI transcription factor (MADS/AGL) 0.05 OrthoFinder output from all 47 species
Gb_38922 AGL6 transcription factor (MADS/AGL) 0.03 OrthoFinder output from all 47 species
Gb_41550 No alias transcription factor (MADS/AGL) 0.03 OrthoFinder output from all 47 species
LOC_Os02g49840.1 AGL16, LOC_Os02g49840 transcription factor (MADS/AGL) 0.02 OrthoFinder output from all 47 species
LOC_Os02g52340.1 SVP, AGL22,... transcription factor (MADS/AGL) 0.06 OrthoFinder output from all 47 species
LOC_Os03g03070.1 GL19, AGL19,... MADS-box transcription factor 50 OS=Oryza sativa subsp.... 0.05 OrthoFinder output from all 47 species
LOC_Os03g03100.1 AGL14, LOC_Os03g03100 transcription factor (MADS/AGL) 0.03 OrthoFinder output from all 47 species
LOC_Os03g11614.1 AGL2, SEP1,... transcription factor (MADS/AGL) 0.03 OrthoFinder output from all 47 species
LOC_Os03g54160.1 AGL7, AP1, LOC_Os03g54160 transcription factor (MADS/AGL) 0.03 OrthoFinder output from all 47 species
LOC_Os03g54170.1 AGL2, SEP1,... transcription factor (MADS/AGL) 0.03 OrthoFinder output from all 47 species
LOC_Os05g11414.1 SHP2, AGL5,... transcription factor (MADS/AGL) 0.03 OrthoFinder output from all 47 species
LOC_Os06g11330.1 SVP, AGL22,... transcription factor (MADS/AGL) 0.13 OrthoFinder output from all 47 species
LOC_Os06g22540.1 LOC_Os06g22540 no hits & (original description: none) 0.03 OrthoFinder output from all 47 species
LOC_Os09g32948.1 AGL9, SEP3,... transcription factor (MADS/AGL) 0.03 OrthoFinder output from all 47 species
Len_g10100 SHP2, AGL5 MADS/AGL-type transcription factor & original description: none 0.03 OrthoFinder output from all 47 species
Len_g38722 AGL1, SHP1 MADS/AGL-type transcription factor & original description: none 0.03 OrthoFinder output from all 47 species
Lfl_g25148 AGL10, CAL1, CAL not classified & original description: none 0.02 OrthoFinder output from all 47 species
Lfl_g31128 SOC1, AGL20, ATSOC1 MADS/AGL-type transcription factor & original description: none 0.04 OrthoFinder output from all 47 species
MA_19296g0010 AGL9, SEP3 no hits & (original description: none) 0.05 OrthoFinder output from all 47 species
MA_254338g0010 SOC1, AGL20, ATSOC1 transcription factor (MADS/AGL) 0.03 OrthoFinder output from all 47 species
MA_9841429g0010 AGL9, SEP3 transcription factor (MADS/AGL) 0.02 OrthoFinder output from all 47 species
Msp_g06052 No alias MADS/AGL-type transcription factor & original description: none 0.02 OrthoFinder output from all 47 species
Msp_g38153 STK, AGL11 MADS/AGL-type transcription factor & original description: none 0.04 OrthoFinder output from all 47 species
Nbi_g11231 GL19, AGL19 MADS/AGL-type transcription factor & original description: none 0.03 OrthoFinder output from all 47 species
Ore_g44138 SHP2, AGL5 MADS/AGL-type transcription factor & original description: none 0.02 OrthoFinder output from all 47 species
Pir_g48804 AGL8, FUL regulatory protein *(AP1/CAL/FUL) of floral meristem... 0.05 OrthoFinder output from all 47 species
Pir_g60165 STK, AGL11 MADS/AGL-type transcription factor & original description: none 0.02 OrthoFinder output from all 47 species
Ppi_g41504 SHP2, AGL5 MADS/AGL-type transcription factor & original description: none 0.03 OrthoFinder output from all 47 species
Ppi_g62136 SHP2, AGL5 MADS/AGL-type transcription factor & original description: none 0.02 OrthoFinder output from all 47 species
Sacu_v1.1_s0008.g004031 AGL29 MADS/AGL-type transcription factor & original... 0.02 OrthoFinder output from all 47 species
Sacu_v1.1_s0014.g006239 SHP2, AGL5 not classified & original description: CDS=497-1018 0.03 OrthoFinder output from all 47 species
Sacu_v1.1_s0014.g006240 No alias not classified & original description: CDS=1-240 0.02 OrthoFinder output from all 47 species
Sacu_v1.1_s0207.g025791 AGL65 MADS/AGL-type transcription factor & original... 0.03 OrthoFinder output from all 47 species
Sacu_v1.1_s0271.g027022 AGL7, AP1 MADS/AGL-type transcription factor & original... 0.02 OrthoFinder output from all 47 species
Sam_g06487 No alias MADS/AGL-type transcription factor & original description: none 0.02 OrthoFinder output from all 47 species
Sam_g21681 No alias MADS/AGL-type transcription factor & original description: none 0.02 OrthoFinder output from all 47 species
Sam_g27719 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Sam_g30262 No alias MADS/AGL-type transcription factor & original description: none 0.02 OrthoFinder output from all 47 species
Sam_g31601 No alias MADS/AGL-type transcription factor & original description: none 0.05 OrthoFinder output from all 47 species
Sam_g50341 No alias MADS/AGL-type transcription factor & original description: none 0.03 OrthoFinder output from all 47 species
Smo113962 AGL104 RNA biosynthesis.transcriptional activation.MADS box... 0.02 OrthoFinder output from all 47 species
Smo121275 AGL7, AP1 RNA biosynthesis.transcriptional activation.MADS box... 0.03 OrthoFinder output from all 47 species
Smo69980 AGL67 RNA biosynthesis.transcriptional activation.MADS box... 0.02 OrthoFinder output from all 47 species
Solyc01g093960.3.1 AGL6, Solyc01g093960 transcription factor (MADS/AGL) 0.02 OrthoFinder output from all 47 species
Solyc03g114840.3.1 AGL2, SEP1,... transcription factor (MADS/AGL) 0.03 OrthoFinder output from all 47 species
Solyc04g076280.4.1 AGL24, Solyc04g076280 MADS-box protein SVP OS=Arabidopsis thaliana... 0.03 OrthoFinder output from all 47 species
Solyc06g059970.4.1 PI, Solyc06g059970 transcription factor (MADS/AGL) 0.03 OrthoFinder output from all 47 species
Solyc10g080030.2.1 AGL18, Solyc10g080030 transcription factor (MADS/AGL) 0.02 OrthoFinder output from all 47 species
Solyc11g010570.2.1 SVP, AGL22,... transcription factor (MADS/AGL) 0.04 OrthoFinder output from all 47 species
Tin_g05935 AGL6 MADS/AGL-type transcription factor & original description: none 0.03 OrthoFinder output from all 47 species
Tin_g45158 AGL7, AP1 MADS/AGL-type transcription factor & original description: none 0.03 OrthoFinder output from all 47 species
Zm00001e000846_P003 AGL4, SEP2,... transcription factor (MADS/AGL) 0.04 OrthoFinder output from all 47 species
Zm00001e003667_P001 AGL9, SEP3,... transcription factor (MADS/AGL) 0.04 OrthoFinder output from all 47 species
Zm00001e005705_P004 AGL7, AP1, Zm00001e005705 transcription factor (MADS/AGL) 0.04 OrthoFinder output from all 47 species
Zm00001e005708_P002 AGL2, SEP1,... transcription factor (MADS/AGL) 0.03 OrthoFinder output from all 47 species
Zm00001e006950_P001 AGL32, TT16,... transcription factor (MADS/AGL) 0.05 OrthoFinder output from all 47 species
Zm00001e010125_P001 AGL9, SEP3,... transcription factor (MADS/AGL) 0.03 OrthoFinder output from all 47 species
Zm00001e012026_P002 AGL7, AP1, Zm00001e012026 transcription factor (MADS/AGL) 0.03 OrthoFinder output from all 47 species
Zm00001e016529_P004 SHP2, AGL5,... transcription factor (MADS/AGL) 0.04 OrthoFinder output from all 47 species
Zm00001e018811_P001 AGL14, Zm00001e018811 transcription factor (MADS/AGL) 0.03 OrthoFinder output from all 47 species
Zm00001e030373_P001 AGL10, CAL1,... transcription factor (MADS/AGL) 0.04 OrthoFinder output from all 47 species
Zm00001e031267_P003 SHP2, AGL5,... transcription factor (MADS/AGL) 0.03 OrthoFinder output from all 47 species
Zm00001e033144_P001 AGL29, Zm00001e033144 transcription factor (MADS/AGL) 0.04 OrthoFinder output from all 47 species
Zm00001e034629_P001 AGL9, SEP3,... transcription factor (MADS/AGL) 0.05 OrthoFinder output from all 47 species
Zm00001e038716_P004 AGL9, SEP3,... transcription factor (MADS/AGL) 0.04 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
MF GO:0003677 DNA binding IEA Interproscan
MF GO:0003700 DNA-binding transcription factor activity IEA Interproscan
CC GO:0005634 nucleus IEA Interproscan
BP GO:0006355 regulation of DNA-templated transcription IEA Interproscan
MF GO:0046983 protein dimerization activity IEA Interproscan
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Type GO Term Name Evidence Source
MF GO:0005509 calcium ion binding IEP HCCA
BP GO:0009719 response to endogenous stimulus IEP HCCA
BP GO:0009725 response to hormone IEP HCCA
BP GO:0010033 response to organic substance IEP HCCA
BP GO:0042221 response to chemical IEP HCCA
InterPro domains Description Start Stop
IPR002100 TF_MADSbox 10 57
IPR002487 TF_Kbox 91 171
No external refs found!