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  5. Zm00001e035959_P001

Zm00001e035959_P001 (Zm00001e035959)


Aliases : Zm00001e035959

Description : ornithine decarboxylase


Gene families : OG0000356 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000356_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Zm00001e035959_P001
Cluster HCCA: Cluster_148

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00001p00164800 evm_27.TU.AmTr_v1... Polyamine metabolism.putrescine.synthesis.cytosolic... 0.03 OrthoFinder output from all 47 species
AMTR_s00019p00109640 SAMDC,... Polyamine... 0.03 OrthoFinder output from all 47 species
Adi_g004507 SAMDC EC_4.1 carbon-carbon lyase & original description: none 0.02 OrthoFinder output from all 47 species
Adi_g056998 No alias EC_4.1 carbon-carbon lyase & original description: none 0.03 OrthoFinder output from all 47 species
Aev_g16826 No alias EC_4.1 carbon-carbon lyase & original description: none 0.04 OrthoFinder output from all 47 species
Aev_g24454 No alias EC_4.1 carbon-carbon lyase & original description: none 0.01 OrthoFinder output from all 47 species
Aev_g37641 No alias EC_4.1 carbon-carbon lyase & original description: none 0.02 OrthoFinder output from all 47 species
Als_g10247 No alias EC_4.1 carbon-carbon lyase & original description: none 0.04 OrthoFinder output from all 47 species
Als_g35112 SAMDC EC_4.1 carbon-carbon lyase & original description: none 0.03 OrthoFinder output from all 47 species
Als_g38176 No alias EC_4.1 carbon-carbon lyase & original description: none 0.03 OrthoFinder output from all 47 species
Aop_g62652 No alias EC_4.1 carbon-carbon lyase & original description: none 0.03 OrthoFinder output from all 47 species
Aspi01Gene35140.t1 Aspi01Gene35140 EC_4.1 carbon-carbon lyase & original description: none 0.03 OrthoFinder output from all 47 species
Aspi01Gene35148.t1 Aspi01Gene35148 EC_4.1 carbon-carbon lyase & original description: none 0.03 OrthoFinder output from all 47 species
Aspi01Gene61164.t1 Aspi01Gene61164 EC_4.1 carbon-carbon lyase & original description: none 0.03 OrthoFinder output from all 47 species
Azfi_s0090.g042654 SAMDC EC_4.1 carbon-carbon lyase & original description: CDS=700-2217 0.04 OrthoFinder output from all 47 species
Cba_g15212 No alias EC_4.1 carbon-carbon lyase & original description: none 0.02 OrthoFinder output from all 47 species
Ceric.07G058600.1 SAMDC, Ceric.07G058600 EC_4.1 carbon-carbon lyase & original description:... 0.05 OrthoFinder output from all 47 species
Ceric.15G068700.1 Ceric.15G068700 EC_4.1 carbon-carbon lyase & original description:... 0.02 OrthoFinder output from all 47 species
Cre03.g159500 No alias Polyamine metabolism.putrescine.synthesis.cytosolic... 0.01 OrthoFinder output from all 47 species
Dac_g11559 No alias EC_4.1 carbon-carbon lyase & original description: none 0.02 OrthoFinder output from all 47 species
Dac_g15865 No alias EC_4.1 carbon-carbon lyase & original description: none 0.02 OrthoFinder output from all 47 species
Dde_g17531 SAMDC EC_4.1 carbon-carbon lyase & original description: none 0.03 OrthoFinder output from all 47 species
GSVIVT01015447001 No alias Polyamine metabolism.putrescine.synthesis.cytosolic... 0.02 OrthoFinder output from all 47 species
Gb_19970 No alias S-adenosyl methionine decarboxylase 0.03 OrthoFinder output from all 47 species
Gb_37304 No alias ornithine decarboxylase 0.02 OrthoFinder output from all 47 species
Gb_37305 No alias ornithine decarboxylase 0.02 OrthoFinder output from all 47 species
LOC_Os09g37120.1 LOC_Os09g37120 ornithine decarboxylase 0.09 OrthoFinder output from all 47 species
Len_g21197 No alias ornithine decarboxylase & original description: none 0.02 OrthoFinder output from all 47 species
Lfl_g25624 No alias EC_4.1 carbon-carbon lyase & original description: none 0.02 OrthoFinder output from all 47 species
MA_10434945g0010 SAMDC S-adenosyl methionine decarboxylase 0.03 OrthoFinder output from all 47 species
MA_123449g0010 No alias S-adenosyl methionine decarboxylase 0.03 OrthoFinder output from all 47 species
MA_726162g0010 SAMDC S-adenosyl methionine decarboxylase 0.03 OrthoFinder output from all 47 species
MA_9879049g0010 SAMDC S-adenosyl methionine decarboxylase 0.03 OrthoFinder output from all 47 species
Mp1g22070.1 No alias ornithine decarboxylase. S-adenosyl methionine decarboxylase 0.02 OrthoFinder output from all 47 species
Msp_g01657 No alias EC_4.1 carbon-carbon lyase & original description: none 0.02 OrthoFinder output from all 47 species
Msp_g05405 No alias EC_4.1 carbon-carbon lyase & original description: none 0.02 OrthoFinder output from all 47 species
Msp_g27068 No alias EC_4.1 carbon-carbon lyase & original description: none 0.02 OrthoFinder output from all 47 species
Nbi_g07578 No alias EC_4.1 carbon-carbon lyase & original description: none 0.03 OrthoFinder output from all 47 species
Nbi_g09562 No alias EC_4.1 carbon-carbon lyase & original description: none 0.03 OrthoFinder output from all 47 species
Nbi_g10143 No alias EC_4.1 carbon-carbon lyase & original description: none 0.03 OrthoFinder output from all 47 species
Nbi_g25083 No alias ornithine decarboxylase & original description: none 0.02 OrthoFinder output from all 47 species
Ore_g13984 SAMDC4, BUD2 not classified & original description: none 0.02 OrthoFinder output from all 47 species
Pir_g14868 SAMDC EC_4.1 carbon-carbon lyase & original description: none 0.03 OrthoFinder output from all 47 species
Pir_g32435 No alias EC_4.1 carbon-carbon lyase & original description: none 0.01 OrthoFinder output from all 47 species
Pnu_g07560 No alias EC_4.1 carbon-carbon lyase & original description: none 0.02 OrthoFinder output from all 47 species
Pnu_g08792 No alias EC_4.1 carbon-carbon lyase & original description: none 0.02 OrthoFinder output from all 47 species
Pnu_g18524 No alias EC_4.1 carbon-carbon lyase & original description: none 0.02 OrthoFinder output from all 47 species
Pnu_g22755 SAMDC EC_4.1 carbon-carbon lyase & original description: none 0.04 OrthoFinder output from all 47 species
Ppi_g09591 No alias EC_4.1 carbon-carbon lyase & original description: none 0.02 OrthoFinder output from all 47 species
Ppi_g15445 No alias EC_4.1 carbon-carbon lyase & original description: none 0.02 OrthoFinder output from all 47 species
Ppi_g39268 No alias EC_4.1 carbon-carbon lyase & original description: none 0.02 OrthoFinder output from all 47 species
Ppi_g54737 SAMDC EC_4.1 carbon-carbon lyase & original description: none 0.02 OrthoFinder output from all 47 species
Smo232921 No alias Polyamine metabolism.putrescine.synthesis.cytosolic... 0.02 OrthoFinder output from all 47 species
Solyc01g080380.4.1 SAMDC4, BUD2,... S-adenosyl methionine decarboxylase 0.02 OrthoFinder output from all 47 species
Spa_g13328 No alias EC_4.1 carbon-carbon lyase & original description: none 0.02 OrthoFinder output from all 47 species
Spa_g37126 SAMDC EC_4.1 carbon-carbon lyase & original description: none 0.03 OrthoFinder output from all 47 species
Tin_g05489 No alias EC_4.1 carbon-carbon lyase & original description: none 0.02 OrthoFinder output from all 47 species
Tin_g08684 No alias ornithine decarboxylase & original description: none 0.03 OrthoFinder output from all 47 species
Tin_g26910 No alias EC_4.1 carbon-carbon lyase & original description: none 0.02 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
MF GO:0003824 catalytic activity IEA Interproscan
Toggle parental
Type GO Term Name Evidence Source
MF GO:0004427 inorganic diphosphate phosphatase activity IEP HCCA
MF GO:0004601 peroxidase activity IEP HCCA
MF GO:0005488 binding IEP HCCA
MF GO:0005506 iron ion binding IEP HCCA
BP GO:0006417 regulation of translation IEP HCCA
BP GO:0006810 transport IEP HCCA
BP GO:0006811 monoatomic ion transport IEP HCCA
BP GO:0006812 monoatomic cation transport IEP HCCA
BP GO:0006950 response to stress IEP HCCA
BP GO:0006979 response to oxidative stress IEP HCCA
BP GO:0008150 biological_process IEP HCCA
MF GO:0009678 pyrophosphate hydrolysis-driven proton transmembrane transporter activity IEP HCCA
BP GO:0009733 response to auxin IEP HCCA
BP GO:0009890 negative regulation of biosynthetic process IEP HCCA
BP GO:0009892 negative regulation of metabolic process IEP HCCA
BP GO:0010558 negative regulation of macromolecule biosynthetic process IEP HCCA
BP GO:0010605 negative regulation of macromolecule metabolic process IEP HCCA
BP GO:0010608 post-transcriptional regulation of gene expression IEP HCCA
BP GO:0010629 negative regulation of gene expression IEP HCCA
MF GO:0015078 proton transmembrane transporter activity IEP HCCA
MF GO:0015299 obsolete solute:proton antiporter activity IEP HCCA
MF GO:0015399 primary active transmembrane transporter activity IEP HCCA
MF GO:0016209 antioxidant activity IEP HCCA
MF GO:0016491 oxidoreductase activity IEP HCCA
BP GO:0016567 protein ubiquitination IEP HCCA
MF GO:0016684 oxidoreductase activity, acting on peroxide as acceptor IEP HCCA
MF GO:0016705 oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen IEP HCCA
MF GO:0016717 oxidoreductase activity, acting on paired donors, with oxidation of a pair of donors resulting in the reduction of molecular oxygen to two molecules of water IEP HCCA
MF GO:0016798 hydrolase activity, acting on glycosyl bonds IEP HCCA
MF GO:0016799 hydrolase activity, hydrolyzing N-glycosyl compounds IEP HCCA
BP GO:0017148 negative regulation of translation IEP HCCA
MF GO:0020037 heme binding IEP HCCA
MF GO:0022853 active monoatomic ion transmembrane transporter activity IEP HCCA
MF GO:0030597 RNA glycosylase activity IEP HCCA
MF GO:0030598 rRNA N-glycosylase activity IEP HCCA
BP GO:0031324 negative regulation of cellular metabolic process IEP HCCA
BP GO:0031327 negative regulation of cellular biosynthetic process IEP HCCA
BP GO:0032446 protein modification by small protein conjugation IEP HCCA
BP GO:0034248 regulation of amide metabolic process IEP HCCA
BP GO:0034249 negative regulation of amide metabolic process IEP HCCA
MF GO:0043169 cation binding IEP HCCA
MF GO:0046872 metal ion binding IEP HCCA
MF GO:0046906 tetrapyrrole binding IEP HCCA
MF GO:0046914 transition metal ion binding IEP HCCA
BP GO:0048519 negative regulation of biological process IEP HCCA
BP GO:0048523 negative regulation of cellular process IEP HCCA
BP GO:0050896 response to stimulus IEP HCCA
BP GO:0051172 negative regulation of nitrogen compound metabolic process IEP HCCA
BP GO:0051179 localization IEP HCCA
BP GO:0051234 establishment of localization IEP HCCA
BP GO:0051246 regulation of protein metabolic process IEP HCCA
BP GO:0051248 negative regulation of protein metabolic process IEP HCCA
BP GO:0055085 transmembrane transport IEP HCCA
BP GO:0055114 obsolete oxidation-reduction process IEP HCCA
MF GO:0097159 organic cyclic compound binding IEP HCCA
MF GO:0140102 catalytic activity, acting on a rRNA IEP HCCA
MF GO:1901363 heterocyclic compound binding IEP HCCA
BP GO:1902600 proton transmembrane transport IEP HCCA
BP GO:2000112 regulation of cellular macromolecule biosynthetic process IEP HCCA
BP GO:2000113 negative regulation of cellular macromolecule biosynthetic process IEP HCCA
InterPro domains Description Start Stop
IPR022643 De-COase2_C 294 386
IPR022644 De-COase2_N 62 293
No external refs found!