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  5. Zm00001e035701_P001

Zm00001e035701_P001 (CHC1, Zm00001e035701)


Aliases : CHC1, Zm00001e035701

Description : component BAF60 of chromatin remodeling complex


Gene families : OG0004548 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0004548_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Zm00001e035701_P001
Cluster HCCA: Cluster_137

Target Alias Description ECC score Gene Family Method Actions
Ceric.23G016000.1 CHC1, Ceric.23G016000 SMARCD component *(SWP73) of chromatin remodeling... 0.02 OrthoFinder output from all 47 species
Dde_g16091 CHC1 SMARCD component *(SWP73) of chromatin remodeling... 0.02 OrthoFinder output from all 47 species
Nbi_g02153 CHC1 SMARCD component *(SWP73) of chromatin remodeling... 0.02 OrthoFinder output from all 47 species
Ppi_g05828 CHC1 SMARCD component *(SWP73) of chromatin remodeling... 0.02 OrthoFinder output from all 47 species
Sam_g19720 No alias SMARCD component *(SWP73) of chromatin remodeling... 0.02 OrthoFinder output from all 47 species
Solyc02g068100.3.1 CHC1, Solyc02g068100 component BAF60 of chromatin remodeling complex 0.03 OrthoFinder output from all 47 species
Tin_g03955 CHC1 SMARCD component *(SWP73) of chromaTin remodeling... 0.02 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
MF GO:0005515 protein binding IEA Interproscan
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Type GO Term Name Evidence Source
MF GO:0003690 double-stranded DNA binding IEP HCCA
MF GO:0003743 translation initiation factor activity IEP HCCA
CC GO:0005737 cytoplasm IEP HCCA
CC GO:0005852 eukaryotic translation initiation factor 3 complex IEP HCCA
BP GO:0006355 regulation of DNA-templated transcription IEP HCCA
MF GO:0008135 translation factor activity, RNA binding IEP HCCA
BP GO:0009889 regulation of biosynthetic process IEP HCCA
BP GO:0010468 regulation of gene expression IEP HCCA
BP GO:0010556 regulation of macromolecule biosynthetic process IEP HCCA
BP GO:0019219 regulation of nucleobase-containing compound metabolic process IEP HCCA
BP GO:0019222 regulation of metabolic process IEP HCCA
BP GO:0031323 regulation of cellular metabolic process IEP HCCA
BP GO:0031326 regulation of cellular biosynthetic process IEP HCCA
MF GO:0045182 translation regulator activity IEP HCCA
BP GO:0050789 regulation of biological process IEP HCCA
BP GO:0050794 regulation of cellular process IEP HCCA
BP GO:0051171 regulation of nitrogen compound metabolic process IEP HCCA
BP GO:0051252 regulation of RNA metabolic process IEP HCCA
BP GO:0060255 regulation of macromolecule metabolic process IEP HCCA
BP GO:0065007 biological regulation IEP HCCA
BP GO:0080090 regulation of primary metabolic process IEP HCCA
MF GO:0090079 translation regulator activity, nucleic acid binding IEP HCCA
BP GO:1903506 regulation of nucleic acid-templated transcription IEP HCCA
BP GO:2001141 regulation of RNA biosynthetic process IEP HCCA
InterPro domains Description Start Stop
IPR003121 SWIB_MDM2_domain 314 385
No external refs found!