Aliases : Zm00001e035578
Description : protein factor snRNP27 of U4/U6 U5 small nuclear ribonucleoprotein particle (snRNP)
Gene families : OG0004048 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0004048_tree
Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.
Target | Alias | Description | ECC score | Gene Family Method | Actions |
---|---|---|---|---|---|
Adi_g100398 | No alias | component *(SNRNP27) of U4/U6.U5 tri-snRNP complex &... | 0.02 | OrthoFinder output from all 47 species | |
LOC_Os02g26349.1 | LOC_Os02g26349 | protein factor snRNP27 of U4/U6 U5 small nuclear... | 0.08 | OrthoFinder output from all 47 species | |
Msp_g06510 | No alias | component *(SNRNP27) of U4/U6.U5 tri-snRNP complex &... | 0.02 | OrthoFinder output from all 47 species |
Type | GO Term | Name | Evidence | Source |
---|---|---|---|---|
BP | GO:0008380 | RNA splicing | IEA | Interproscan |
Type | GO Term | Name | Evidence | Source |
---|---|---|---|---|
CC | GO:0000786 | nucleosome | IEP | HCCA |
MF | GO:0003676 | nucleic acid binding | IEP | HCCA |
MF | GO:0003677 | DNA binding | IEP | HCCA |
MF | GO:0005488 | binding | IEP | HCCA |
CC | GO:0005575 | cellular_component | IEP | HCCA |
CC | GO:0005875 | microtubule associated complex | IEP | HCCA |
BP | GO:0006325 | chromatin organization | IEP | HCCA |
BP | GO:0006334 | nucleosome assembly | IEP | HCCA |
BP | GO:0006338 | chromatin remodeling | IEP | HCCA |
BP | GO:0007017 | microtubule-based process | IEP | HCCA |
CC | GO:0015934 | large ribosomal subunit | IEP | HCCA |
BP | GO:0016043 | cellular component organization | IEP | HCCA |
CC | GO:0018995 | host cellular component | IEP | HCCA |
BP | GO:0022607 | cellular component assembly | IEP | HCCA |
CC | GO:0030286 | dynein complex | IEP | HCCA |
CC | GO:0032991 | protein-containing complex | IEP | HCCA |
CC | GO:0032993 | protein-DNA complex | IEP | HCCA |
CC | GO:0033643 | host cell part | IEP | HCCA |
CC | GO:0033646 | host intracellular part | IEP | HCCA |
CC | GO:0033647 | host intracellular organelle | IEP | HCCA |
CC | GO:0033648 | host intracellular membrane-bounded organelle | IEP | HCCA |
BP | GO:0034728 | nucleosome organization | IEP | HCCA |
CC | GO:0042025 | host cell nucleus | IEP | HCCA |
BP | GO:0043933 | protein-containing complex organization | IEP | HCCA |
CC | GO:0044391 | ribosomal subunit | IEP | HCCA |
CC | GO:0044815 | DNA packaging complex | IEP | HCCA |
BP | GO:0065003 | protein-containing complex assembly | IEP | HCCA |
BP | GO:0065004 | protein-DNA complex assembly | IEP | HCCA |
BP | GO:0071824 | protein-DNA complex subunit organization | IEP | HCCA |
BP | GO:0071840 | cellular component organization or biogenesis | IEP | HCCA |
MF | GO:0097159 | organic cyclic compound binding | IEP | HCCA |
MF | GO:1901363 | heterocyclic compound binding | IEP | HCCA |
CC | GO:1990904 | ribonucleoprotein complex | IEP | HCCA |
InterPro domains | Description | Start | Stop |
---|---|---|---|
IPR013957 | SNRNP27 | 138 | 192 |
No external refs found! |