Zm00001e035536_P002 (AT-RSH2, ATRSH2,...)

Aliases : AT-RSH2, ATRSH2, RSH2, Zm00001e035536

Description : Probable GTP diphosphokinase RSH2, chloroplastic OS=Oryza sativa subsp. japonica (sp|q7xap4|rsh2_orysj : 504.0)

Gene families : OG0001778 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0001778_tree

Sequence : coding (download), protein (download)

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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.

Type	Description	Actions
Neighborhood	HRR: Zm00001e035536_P002

Target	Alias	Description	ECC score	Gene Family Method
AT1G54130	RSH3, AT-RSH3, ATRSH3	RELA/SPOT homolog 3	0.03	OrthoFinder output from all 47 species
Adi_g013117	RSH3, AT-RSH3, ATRSH3	bifunctional ppGpp synthetase and hydrolase *(RSH) &...	0.02	OrthoFinder output from all 47 species
Als_g03864	RSH3, AT-RSH3, ATRSH3	bifunctional ppGpp synthetase and hydrolase *(RSH) &...	0.02	OrthoFinder output from all 47 species
Als_g51164	AT-RSH2, ATRSH2, RSH2	bifunctional ppGpp synthetase and hydrolase *(RSH) &...	0.02	OrthoFinder output from all 47 species
Aop_g08507	AT-RSH2, ATRSH2, RSH2	bifunctional ppGpp synthetase and hydrolase *(RSH) &...	0.03	OrthoFinder output from all 47 species
Aspi01Gene40198.t1	AT-RSH2, ATRSH2,...	bifunctional ppGpp synthetase and hydrolase *(RSH) &...	0.03	OrthoFinder output from all 47 species
Aspi01Gene52141.t1	RSH3, AT-RSH3,...	bifunctional ppGpp synthetase and hydrolase *(RSH) &...	0.03	OrthoFinder output from all 47 species
Ehy_g01517	AT-RSH2, ATRSH2, RSH2	bifunctional ppGpp synthetase and hydrolase *(RSH) &...	0.04	OrthoFinder output from all 47 species
Ehy_g06085	AT-RSH2, ATRSH2, RSH2	bifunctional ppGpp synthetase and hydrolase *(RSH) &...	0.04	OrthoFinder output from all 47 species
GSVIVT01016749001	RSH3, AT-RSH3, ATRSH3	Probable GTP diphosphokinase RSH3, chloroplastic...	0.04	OrthoFinder output from all 47 species
Sacu_v1.1_s0171.g024376	AT-RSH2, ATRSH2, RSH2	bifunctional ppGpp synthetase and hydrolase *(RSH) &...	0.02	OrthoFinder output from all 47 species

Type	GO Term	Name	Evidence	Source
BP	GO:0006139	nucleobase-containing compound metabolic process	None	Extended
BP	GO:0006163	purine nucleotide metabolic process	None	Extended
BP	GO:0006725	cellular aromatic compound metabolic process	None	Extended
BP	GO:0006753	nucleoside phosphate metabolic process	None	Extended
BP	GO:0006793	phosphorus metabolic process	None	Extended
BP	GO:0006796	phosphate-containing compound metabolic process	None	Extended
BP	GO:0006807	nitrogen compound metabolic process	None	Extended
BP	GO:0008150	biological_process	None	Extended
BP	GO:0008152	metabolic process	None	Extended
BP	GO:0009117	nucleotide metabolic process	None	Extended
BP	GO:0009150	purine ribonucleotide metabolic process
None	Extended
BP	GO:0009259	ribonucleotide metabolic process	None	Extended
BP	GO:0009987	cellular process	None	Extended
BP	GO:0015969	guanosine tetraphosphate metabolic process	IEA	Interproscan
BP	GO:0019637	organophosphate metabolic process	None	Extended
BP	GO:0019693	ribose phosphate metabolic process	None	Extended
BP	GO:0033865	nucleoside bisphosphate metabolic process	None	Extended
BP	GO:0033875	ribonucleoside bisphosphate metabolic process	None	Extended
BP	GO:0034032	purine nucleoside bisphosphate metabolic process	None	Extended
BP	GO:0034035	purine ribonucleoside bisphosphate metabolic process	None	Extended
BP	GO:0034641	cellular nitrogen compound metabolic process	None	Extended
BP	GO:0044237	cellular metabolic process	None	Extended
BP	GO:0044238	primary metabolic process	None	Extended
BP	GO:0044281	small molecule metabolic process	None	Extended
BP	GO:0046483	heterocycle metabolic process	None	Extended
BP	GO:0055086	nucleobase-containing small molecule metabolic process	None	Extended
BP	GO:0071704	organic substance metabolic process	None	Extended
BP	GO:0072521	purine-containing compound metabolic process	None	Extended
BP	GO:1901135	carbohydrate derivative metabolic process	None	Extended
BP	GO:1901360	organic cyclic compound metabolic process	None	Extended
BP	GO:1901564	organonitrogen compound metabolic process	None	Extended

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Type	GO Term	Name	Evidence	Source
MF	GO:0004180	carboxypeptidase activity	IEP	HCCA
MF	GO:0004185	serine-type carboxypeptidase activity	IEP	HCCA
CC	GO:0005743	mitochondrial inner membrane	IEP	HCCA
BP	GO:0006848	pyruvate transport	IEP	HCCA
BP	GO:0006850	mitochondrial pyruvate transmembrane transport	IEP	HCCA
MF	GO:0008236	serine-type peptidase activity	IEP	HCCA
MF	GO:0008238	exopeptidase activity	IEP	HCCA
BP	GO:0015711	organic anion transport	IEP	HCCA
BP	GO:0015718	monocarboxylic acid transport	IEP	HCCA
BP	GO:0015849	organic acid transport	IEP	HCCA
CC	GO:0016020	membrane	IEP	HCCA
MF	GO:0017171	serine hydrolase activity	IEP	HCCA
CC	GO:0019866	organelle inner membrane	IEP	HCCA
MF	GO:0030246	carbohydrate binding	IEP	HCCA
CC	GO:0031090	organelle membrane	IEP	HCCA
CC	GO:0031966	mitochondrial membrane	IEP	HCCA
CC	GO:0046658	obsolete anchored component of plasma membrane	IEP	HCCA
BP	GO:0046942	carboxylic acid transport	IEP	HCCA
MF	GO:0070008	serine-type exopeptidase activity	IEP	HCCA
BP	GO:1901475	pyruvate transmembrane transport	IEP	HCCA
BP	GO:1903825	organic acid transmembrane transport	IEP	HCCA
BP	GO:1905039	carboxylic acid transmembrane transport	IEP	HCCA
BP	GO:1990542	mitochondrial transmembrane transport	IEP	HCCA

InterPro domains	Description	Start	Stop
IPR007685	RelA_SpoT	352	461

External Links

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Zm00001e035536_P002 (AT-RSH2, ATRSH2,...)

Expression Profile

Co-expression Networks

Expression Context Conservation (ECC)

Functional Annotation