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  5. Zm00001e035117_P001

Zm00001e035117_P001 (GDC1, Zm00001e035117)


Aliases : GDC1, Zm00001e035117

Description : SRP insertion system TIC-to-SRP handover factor (LTD)


Gene families : OG0006316 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0006316_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Zm00001e035117_P001
Cluster HCCA: Cluster_114

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00062p00076280 GDC1,... Protein LHCP TRANSLOCATION DEFECT OS=Arabidopsis thaliana 0.02 OrthoFinder output from all 47 species
AT1G50900 GDC1 Ankyrin repeat family protein 0.11 OrthoFinder output from all 47 species
Adi_g005475 GDC1 SRP insertion system TIC-to-SRP handover factor *(LTD) &... 0.05 OrthoFinder output from all 47 species
Aev_g12435 GDC1 SRP insertion system TIC-to-SRP handover factor *(LTD) &... 0.03 OrthoFinder output from all 47 species
Aob_g00497 GDC1 SRP insertion system TIC-to-SRP handover factor *(LTD) &... 0.03 OrthoFinder output from all 47 species
Aop_g15935 GDC1 SRP insertion system TIC-to-SRP handover factor *(LTD) &... 0.03 OrthoFinder output from all 47 species
Cba_g00456 GDC1 SRP insertion system TIC-to-SRP handover factor *(LTD) &... 0.02 OrthoFinder output from all 47 species
Cre12.g551950 GDC1 Protein LHCP TRANSLOCATION DEFECT OS=Arabidopsis thaliana 0.04 OrthoFinder output from all 47 species
Dac_g00424 GDC1 SRP insertion system TIC-to-SRP handover factor *(LTD) &... 0.03 OrthoFinder output from all 47 species
GSVIVT01002001001 GDC1 Protein LHCP TRANSLOCATION DEFECT OS=Arabidopsis thaliana 0.08 OrthoFinder output from all 47 species
Gb_05108 GDC1 SRP insertion system TIC-to-SRP handover factor (LTD) 0.03 OrthoFinder output from all 47 species
LOC_Os07g33660.1 GDC1, LOC_Os07g33660 SRP insertion system TIC-to-SRP handover factor (LTD) 0.16 OrthoFinder output from all 47 species
Len_g02031 GDC1 SRP insertion system TIC-to-SRP handover factor *(LTD) &... 0.04 OrthoFinder output from all 47 species
Lfl_g00282 GDC1 SRP insertion system TIC-to-SRP handover factor *(LTD) &... 0.06 OrthoFinder output from all 47 species
MA_450177g0010 GDC1 no hits & (original description: none) 0.05 OrthoFinder output from all 47 species
Mp3g06400.1 GDC1 SRP insertion system TIC-to-SRP handover factor (LTD) 0.09 OrthoFinder output from all 47 species
Nbi_g01699 GDC1 SRP insertion system TIC-to-SRP handover factor *(LTD) &... 0.02 OrthoFinder output from all 47 species
Pp3c5_16520V3.1 GDC1, Pp3c5_16520 Ankyrin repeat family protein 0.02 OrthoFinder output from all 47 species
Sacu_v1.1_s0006.g002932 GDC1 SRP insertion system TIC-to-SRP handover factor *(LTD) &... 0.04 OrthoFinder output from all 47 species
Sam_g23702 No alias SRP insertion system TIC-to-SRP handover factor *(LTD) &... 0.03 OrthoFinder output from all 47 species
Smo228083 GDC1 Protein LHCP TRANSLOCATION DEFECT OS=Arabidopsis thaliana 0.02 OrthoFinder output from all 47 species
Solyc10g006370.3.1 GDC1, Solyc10g006370 SRP insertion system TIC-to-SRP handover factor (LTD) 0.1 OrthoFinder output from all 47 species
Spa_g51015 GDC1 SRP insertion system TIC-to-SRP handover factor *(LTD) &... 0.04 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
MF GO:0009055 electron transfer activity IEP HCCA
BP GO:0010207 photosystem II assembly IEP HCCA
BP GO:0022607 cellular component assembly IEP HCCA
BP GO:0043933 protein-containing complex organization IEP HCCA
MF GO:0051536 iron-sulfur cluster binding IEP HCCA
MF GO:0051540 metal cluster binding IEP HCCA
BP GO:0065003 protein-containing complex assembly IEP HCCA

No InterPro domains available for this sequence

No external refs found!