Zm00001e034696_P001 (PBG1, Zm00001e034696)

Aliases : PBG1, Zm00001e034696

Description : component beta type-7 of 26S proteasome

Gene families : OG0004102 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0004102_tree

Sequence : coding (download), protein (download)

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.

Type	Description	Actions
Neighborhood	HRR: Zm00001e034696_P001

Target	Alias	Description	ECC score	Gene Family Method
AT1G56450	PBG1	20S proteasome beta subunit G1	0.04	OrthoFinder output from all 47 species
Aev_g44777	PBG1	beta-type-7 component *(PBG) of 26S proteasome &...	0.06	OrthoFinder output from all 47 species
Azfi_s0350.g066539	PBG1	beta-type-7 component *(PBG) of 26S proteasome &...	0.03	OrthoFinder output from all 47 species
Ceric.08G036200.1	PBG1, Ceric.08G036200	beta-type-7 component *(PBG) of 26S proteasome &...	0.02	OrthoFinder output from all 47 species
Cpa\|evm.model.tig00000808.43	PBG1	Protein degradation.26S proteasome.20S core...	0.04	OrthoFinder output from all 47 species
Cre06.g280850	PBG1	Protein degradation.26S proteasome.20S core...	0.08	OrthoFinder output from all 47 species
Dac_g00589	PBG1	beta-type-7 component *(PBG) of 26S proteasome &...	0.02	OrthoFinder output from all 47 species
Dcu_g02600	PBG1	beta-type-7 component *(PBG) of 26S proteasome &...	0.05	OrthoFinder output from all 47 species
GSVIVT01025150001	PBG1	Protein degradation.26S proteasome.20S core...	0.07	OrthoFinder output from all 47 species
Gb_09437	PBG1	component beta type-7 of 26S proteasome	0.03	OrthoFinder output from all 47 species
LOC_Os09g33986.1	PBG1, LOC_Os09g33986	component beta type-7 of 26S proteasome	0.03	OrthoFinder output from all 47 species
MA_10427481g0010	PBG1	component beta type-7 of 26S proteasome	0.03	OrthoFinder output from all 47 species
Mp6g01810.1	PBG1	component beta type-7 of 26S proteasome	0.04	OrthoFinder output from all 47 species
Nbi_g04663	PBG1	beta-type-7 component *(PBG) of 26S proteasome &...	0.03	OrthoFinder output from all 47 species
Pir_g00404	PBG1	beta-type-7 component *(PBG) of 26S proteasome &...	0.02	OrthoFinder output from all 47 species
Sam_g51060	No alias	beta-type-7 component *(PBG) of 26S proteasome &...	0.04	OrthoFinder output from all 47 species
Smo271646	PBG1	Protein degradation.26S proteasome.20S core...	0.02	OrthoFinder output from all 47 species
Solyc11g069150.3.1	PBG1, Solyc11g069150	component beta type-7 of 26S proteasome	0.03	OrthoFinder output from all 47 species
Spa_g08872	PBG1	beta-type-7 component *(PBG) of 26S proteasome &...	0.03	OrthoFinder output from all 47 species
Spa_g16372	PBG1	beta-type-7 component *(PBG) of 26S proteasome &...	0.02	OrthoFinder output from all 47 species
Spa_g29943	PBG1	beta-type-7 component *(PBG) of 26S proteasome &...	0.03	OrthoFinder output from all 47 species
Tin_g06402	PBG1	beta-type-7 component *(PBG) of 26S proteasome &...	0.02	OrthoFinder output from all 47 species

Type	GO Term	Name	Evidence	Source
MF	GO:0003674	molecular_function	None	Extended
MF	GO:0003824	catalytic activity	None	Extended
MF	GO:0004175	endopeptidase activity	None	Extended
MF	GO:0004298	threonine-type endopeptidase activity	IEA	Interproscan
CC	GO:0005575	cellular_component	None	Extended
CC	GO:0005839	proteasome core complex	IEA	Interproscan
BP	GO:0006508	proteolysis	None	Extended
BP	GO:0006807	nitrogen compound metabolic process	None	Extended
BP	GO:0008150	biological_process	None	Extended
BP	GO:0008152	metabolic process	None	Extended
MF	GO:0008233	peptidase activity	None	Extended
MF	GO:0016787	hydrolase activity	None	Extended
BP	GO:0019538	protein metabolic process	None	Extended
CC	GO:0032991	protein-containing complex	None	Extended
BP	GO:0043170	macromolecule metabolic process	None	Extended
BP	GO:0044238	primary metabolic process	None	Extended
BP	GO:0051603	proteolysis involved in protein catabolic process	IEA	Interproscan
MF	GO:0070003	threonine-type peptidase activity	None	Extended
BP	GO:0071704	organic substance metabolic process	None	Extended
MF	GO:0140096	catalytic activity, acting on a protein	None	Extended
CC	GO:0140535	intracellular protein-containing complex	None	Extended
BP	GO:1901564	organonitrogen compound metabolic process	None	Extended
CC	GO:1902494	catalytic complex	None	Extended

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Type	GO Term	Name	Evidence	Source
MF	GO:0003743	translation initiation factor activity	IEP	HCCA
MF	GO:0004455	ketol-acid reductoisomerase activity	IEP	HCCA
BP	GO:0006413	translational initiation	IEP	HCCA
BP	GO:0006479	protein methylation	IEP	HCCA
BP	GO:0006480	N-terminal protein amino acid methylation	IEP	HCCA
BP	GO:0006520	amino acid metabolic process	IEP	HCCA
MF	GO:0008135	translation factor activity, RNA binding	IEP	HCCA
MF	GO:0008168	methyltransferase activity	IEP	HCCA
BP	GO:0008213	protein alkylation	IEP	HCCA
BP	GO:0009081	branched-chain amino acid metabolic process	IEP	HCCA
BP	GO:0009082	branched-chain amino acid biosynthetic process	IEP	HCCA
BP	GO:0016053	organic acid biosynthetic process	IEP	HCCA
MF	GO:0016614	oxidoreductase activity, acting on CH-OH group of donors	IEP	HCCA
MF	GO:0016616	oxidoreductase activity, acting on the CH-OH group of donors, NAD or NADP as acceptor	IEP	HCCA
MF	GO:0016741	transferase activity, transferring one-carbon groups	IEP	HCCA
BP	GO:0031365	N-terminal protein amino acid modification	IEP	HCCA
BP	GO:0032259	methylation	IEP	HCCA
BP	GO:0043414	macromolecule methylation	IEP	HCCA
BP	GO:0044283	small molecule biosynthetic process	IEP	HCCA
MF	GO:0045182	translation regulator activity	IEP	HCCA
MF	GO:0090079	translation regulator activity, nucleic acid binding	IEP	HCCA
MF	GO:0097159	organic cyclic compound binding	IEP	HCCA
MF	GO:1901363	heterocyclic compound binding	IEP	HCCA

InterPro domains	Description	Start	Stop
IPR001353	Proteasome_sua/b	43	230

External Links

No external refs found!

Zm00001e034696_P001 (PBG1, Zm00001e034696)

Expression Profile

Co-expression Networks

Expression Context Conservation (ECC)

Functional Annotation