Zm00001e034034_P004 (EBS, Zm00001e034034)


Aliases : EBS, Zm00001e034034

Description : component BAH of BAH-EMF1 Polycomb silencing complex


Gene families : OG0000671 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000671_tree

Sequence : coding (download), protein (download)


Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Zm00001e034034_P004

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00002p00245890 EBS,... Chromatin organisation.histone modifications.histone... 0.02 OrthoFinder output from all 47 species
Ala_g19338 EBS component *(SHL/EBS) of PRC1 complex & original description: none 0.03 OrthoFinder output from all 47 species
Aspi01Gene29644.t1 EBS, Aspi01Gene29644 component *(SHL/EBS) of PRC1 complex & original description: none 0.02 OrthoFinder output from all 47 species
Ceric.39G020300.1 EBS, Ceric.39G020300 component *(SHL/EBS) of PRC1 complex & original... 0.03 OrthoFinder output from all 47 species
Dac_g25249 EBS component *(SHL/EBS) of PRC1 complex & original description: none 0.03 OrthoFinder output from all 47 species
GSVIVT01004809001 EBS Chromatin organisation.histone modifications.histone... 0.04 OrthoFinder output from all 47 species
LOC_Os07g08880.1 EBS, LOC_Os07g08880 component BAH of BAH-EMF1 Polycomb silencing complex 0.02 OrthoFinder output from all 47 species
LOC_Os08g32620.1 EBS, LOC_Os08g32620 component BAH of BAH-EMF1 Polycomb silencing complex 0.04 OrthoFinder output from all 47 species
Lfl_g04615 EBS component *(SHL/EBS) of PRC1 complex & original description: none 0.02 OrthoFinder output from all 47 species
MA_14897g0020 EBS component BAH of BAH-EMF1 Polycomb silencing complex 0.02 OrthoFinder output from all 47 species
Msp_g39005 EBS component *(SHL/EBS) of PRC1 complex & original description: none 0.03 OrthoFinder output from all 47 species
Ore_g19534 EBS component *(SHL/EBS) of PRC1 complex & original description: none 0.02 OrthoFinder output from all 47 species
Pir_g41690 EBS component *(SHL/EBS) of PRC1 complex & original description: none 0.02 OrthoFinder output from all 47 species
Pnu_g14102 EBS component *(SHL/EBS) of PRC1 complex & original description: none 0.04 OrthoFinder output from all 47 species
Tin_g25986 EBS component *(SHL/EBS) of PRC1 complex & original description: none 0.02 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
MF GO:0003682 chromatin binding IEA Interproscan
Type GO Term Name Evidence Source
CC GO:0000786 nucleosome IEP HCCA
MF GO:0003676 nucleic acid binding IEP HCCA
BP GO:0006325 chromatin organization IEP HCCA
BP GO:0006334 nucleosome assembly IEP HCCA
BP GO:0006338 chromatin remodeling IEP HCCA
BP GO:0022607 cellular component assembly IEP HCCA
CC GO:0032993 protein-DNA complex IEP HCCA
BP GO:0034728 nucleosome organization IEP HCCA
BP GO:0043933 protein-containing complex organization IEP HCCA
CC GO:0044815 DNA packaging complex IEP HCCA
BP GO:0065003 protein-containing complex assembly IEP HCCA
BP GO:0065004 protein-DNA complex assembly IEP HCCA
BP GO:0071824 protein-DNA complex subunit organization IEP HCCA
InterPro domains Description Start Stop
IPR019787 Znf_PHD-finger 140 188
IPR001025 BAH_dom 23 135
No external refs found!