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  5. Zm00001e034028_P002

Zm00001e034028_P002 (AMY1, ATAMY1, Zm00001e034028)


Aliases : AMY1, ATAMY1, Zm00001e034028

Description : alpha amylase


Gene families : OG0000515 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000515_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Zm00001e034028_P002
Cluster HCCA: Cluster_34

Target Alias Description ECC score Gene Family Method Actions
Ceric.17G028300.1 AMY1, ATAMY1,... alpha amylase & original description: pacid=50617601... 0.02 OrthoFinder output from all 47 species
LOC_Os02g52700.1 AMY1, ATAMY1,... alpha amylase 0.04 OrthoFinder output from all 47 species
LOC_Os09g28400.1 AMY1, ATAMY1,... alpha amylase 0.02 OrthoFinder output from all 47 species
LOC_Os09g28420.1 AMY1, ATAMY1,... alpha amylase 0.03 OrthoFinder output from all 47 species
MA_30833g0020 AMY1, ATAMY1 alpha amylase 0.02 OrthoFinder output from all 47 species
Ore_g02338 AMY2, ATAMY2 not classified & original description: none 0.02 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
MF GO:0003824 catalytic activity IEA Interproscan
MF GO:0004556 alpha-amylase activity IEA Interproscan
MF GO:0005509 calcium ion binding IEA Interproscan
BP GO:0005975 carbohydrate metabolic process IEA Interproscan
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Type GO Term Name Evidence Source
MF GO:0000287 magnesium ion binding IEP HCCA
BP GO:0006508 proteolysis IEP HCCA
MF GO:0008233 peptidase activity IEP HCCA
MF GO:0008234 cysteine-type peptidase activity IEP HCCA
BP GO:0008272 sulfate transport IEP HCCA
BP GO:0009308 amine metabolic process IEP HCCA
BP GO:0009690 cytokinin metabolic process IEP HCCA
MF GO:0010333 terpene synthase activity IEP HCCA
BP GO:0010817 regulation of hormone levels IEP HCCA
MF GO:0015103 inorganic anion transmembrane transporter activity IEP HCCA
MF GO:0015116 sulfate transmembrane transporter activity IEP HCCA
BP GO:0015698 inorganic anion transport IEP HCCA
MF GO:0016645 oxidoreductase activity, acting on the CH-NH group of donors IEP HCCA
MF GO:0016835 carbon-oxygen lyase activity IEP HCCA
MF GO:0016838 carbon-oxygen lyase activity, acting on phosphates IEP HCCA
MF GO:0019139 cytokinin dehydrogenase activity IEP HCCA
BP GO:0042445 hormone metabolic process IEP HCCA
BP GO:0065008 regulation of biological quality IEP HCCA
BP GO:0072348 sulfur compound transport IEP HCCA
MF GO:1901682 sulfur compound transmembrane transporter activity IEP HCCA
InterPro domains Description Start Stop
IPR006047 Glyco_hydro_13_cat_dom 45 231
IPR012850 A-amylase_bs_C 365 423
No external refs found!