1. Home
  2. Species
  3. Zea mays
  4. Sequence
  5. Zm00001e033879_P003

Zm00001e033879_P003 (CYCT1;4, Zm00001e033879)


Aliases : CYCT1;4, Zm00001e033879

Description : cyclin (CYCT). regulatory component of CTDK-I polymerase-II kinase complex


Gene families : OG0000467 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000467_tree

Sequence : coding (download), protein (download)


Download

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Zm00001e033879_P003

Target Alias Description ECC score Gene Family Method Actions
Als_g06975 CYCT1;4 regulatory protein *(CYCT) of cell cycle & original... 0.02 OrthoFinder output from all 47 species
Als_g15535 CYCT1;4 regulatory protein *(CYCT) of cell cycle & original... 0.02 OrthoFinder output from all 47 species
Aop_g08325 CYCT1;4 regulatory component *(CYCT) of CTDK-I polymerase-II... 0.04 OrthoFinder output from all 47 species
Azfi_s0157.g053765 CYCT1;4 not classified & original description: CDS=75-1142 0.03 OrthoFinder output from all 47 species
Ceric.17G065700.1 CYCT1;4, Ceric.17G065700 regulatory component *(CYCT) of CTDK-I polymerase-II... 0.03 OrthoFinder output from all 47 species
Cpa|evm.model.tig00020614.112 CYCT1;4 Cell cycle.regulation.cyclins.CYCT-type cyclin 0.02 OrthoFinder output from all 47 species
Cre14.g613900 CYCT1;4 Cell cycle.regulation.cyclins.CYCT-type cyclin 0.02 OrthoFinder output from all 47 species
Dac_g07410 CYCT1;4 regulatory component *(CYCT) of CTDK-I polymerase-II... 0.02 OrthoFinder output from all 47 species
Dcu_g01600 CYCT1;4 regulatory component *(CYCT) of CTDK-I polymerase-II... 0.02 OrthoFinder output from all 47 species
Dde_g10347 CYCT1;4 regulatory protein *(CYCT) of cell cycle & original... 0.02 OrthoFinder output from all 47 species
Gb_13680 CYCT1;4 cyclin (CYCT). regulatory component of CTDK-I... 0.03 OrthoFinder output from all 47 species
LOC_Os02g24190.2 CYCT1;4, LOC_Os02g24190 cyclin (CYCT) 0.03 OrthoFinder output from all 47 species
LOC_Os12g30020.2 CYCT1;4, LOC_Os12g30020 cyclin (CYCT). regulatory component of CTDK-I... 0.03 OrthoFinder output from all 47 species
Mp3g00720.1 CYCT1;4 cyclin (CYCT). regulatory component of CTDK-I... 0.02 OrthoFinder output from all 47 species
Msp_g02819 CYCT1;4 regulatory protein *(CYCT) of cell cycle & original... 0.03 OrthoFinder output from all 47 species
Nbi_g05820 CYCT1;4 regulatory protein *(CYCT) of cell cycle & original... 0.02 OrthoFinder output from all 47 species
Nbi_g14878 CYCT1;4 regulatory protein *(CYCT) of cell cycle & original... 0.04 OrthoFinder output from all 47 species
Pir_g01978 CYCT1;4 regulatory component *(CYCT) of CTDK-I polymerase-II... 0.02 OrthoFinder output from all 47 species
Pnu_g12930 CYCT1;4 regulatory component *(CYCT) of CTDK-I polymerase-II... 0.02 OrthoFinder output from all 47 species
Pnu_g32549 CYCT1;4 regulatory component *(CYCT) of CTDK-I polymerase-II... 0.02 OrthoFinder output from all 47 species
Ppi_g02214 CYCT1;4 regulatory component *(CYCT) of CTDK-I polymerase-II... 0.02 OrthoFinder output from all 47 species
Sam_g14943 No alias regulatory component *(CYCT) of CTDK-I polymerase-II... 0.03 OrthoFinder output from all 47 species
Smo106266 CYCT1;4 Cell cycle.regulation.cyclins.CYCT-type cyclin 0.02 OrthoFinder output from all 47 species
Smo140469 CYCT1;4 RNA biosynthesis.RNA polymerase II-dependent... 0.02 OrthoFinder output from all 47 species
Solyc10g078180.3.1 Solyc10g078180 cyclin (CYCT). regulatory component of CTDK-I... 0.02 OrthoFinder output from all 47 species
Zm00001e000132_P005 CYCT1;4, Zm00001e000132 cyclin (CYCT). regulatory component of CTDK-I... 0.03 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source

No GO annotation available for this sequence
Toggle parental
Type GO Term Name Evidence Source
BP GO:0000413 protein peptidyl-prolyl isomerization IEP HCCA
MF GO:0003676 nucleic acid binding IEP HCCA
MF GO:0003723 RNA binding IEP HCCA
MF GO:0003755 peptidyl-prolyl cis-trans isomerase activity IEP HCCA
MF GO:0005488 binding IEP HCCA
BP GO:0006397 mRNA processing IEP HCCA
BP GO:0006508 proteolysis IEP HCCA
BP GO:0006511 ubiquitin-dependent protein catabolic process IEP HCCA
BP GO:0006807 nitrogen compound metabolic process IEP HCCA
BP GO:0008152 metabolic process IEP HCCA
BP GO:0009056 catabolic process IEP HCCA
BP GO:0009057 macromolecule catabolic process IEP HCCA
BP GO:0016071 mRNA metabolic process IEP HCCA
MF GO:0016853 isomerase activity IEP HCCA
MF GO:0016859 cis-trans isomerase activity IEP HCCA
BP GO:0018193 peptidyl-amino acid modification IEP HCCA
BP GO:0018208 peptidyl-proline modification IEP HCCA
BP GO:0019538 protein metabolic process IEP HCCA
BP GO:0019941 modification-dependent protein catabolic process IEP HCCA
MF GO:0042393 histone binding IEP HCCA
BP GO:0043170 macromolecule metabolic process IEP HCCA
BP GO:0043632 modification-dependent macromolecule catabolic process IEP HCCA
BP GO:0044238 primary metabolic process IEP HCCA
BP GO:0044248 cellular catabolic process IEP HCCA
BP GO:0044260 cellular macromolecule metabolic process IEP HCCA
BP GO:0044265 cellular macromolecule catabolic process IEP HCCA
BP GO:0051603 proteolysis involved in protein catabolic process IEP HCCA
BP GO:0071704 organic substance metabolic process IEP HCCA
MF GO:0097159 organic cyclic compound binding IEP HCCA
MF GO:1901363 heterocyclic compound binding IEP HCCA
BP GO:1901564 organonitrogen compound metabolic process IEP HCCA
BP GO:1901575 organic substance catabolic process IEP HCCA
InterPro domains Description Start Stop
IPR006671 Cyclin_N 36 178
No external refs found!