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  5. Zm00001e033442_P001

Zm00001e033442_P001 (Zm00001e033442)


Aliases : Zm00001e033442

Description : light chain of clathrin triskelion


Gene families : OG0002188 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0002188_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Zm00001e033442_P001
Cluster HCCA: Cluster_63

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00009p00267500 evm_27.TU.AmTr_v1... Vesicle trafficking.clathrin coated vesicle (CCV)... 0.02 OrthoFinder output from all 47 species
Aev_g24594 No alias light chain of clathrin triskelion & original description: none 0.02 OrthoFinder output from all 47 species
Ehy_g08290 No alias light chain of clathrin triskelion & original description: none 0.02 OrthoFinder output from all 47 species
LOC_Os07g27750.1 LOC_Os07g27750 light chain of clathrin triskelion 0.12 OrthoFinder output from all 47 species
Pir_g23570 No alias light chain of clathrin triskelion & original description: none 0.03 OrthoFinder output from all 47 species
Pir_g38862 No alias light chain of clathrin triskelion & original description: none 0.02 OrthoFinder output from all 47 species
Sacu_v1.1_s0074.g017186 No alias light chain of clathrin triskelion & original... 0.03 OrthoFinder output from all 47 species
Sam_g09854 No alias light chain of clathrin triskelion & original description: none 0.01 OrthoFinder output from all 47 species
Smo107473 No alias Vesicle trafficking.clathrin coated vesicle (CCV)... 0.03 OrthoFinder output from all 47 species
Solyc02g078540.4.1 Solyc02g078540 no hits & (original description: none) 0.02 OrthoFinder output from all 47 species
Solyc07g054180.4.1 Solyc07g054180 light chain of clathrin triskelion 0.08 OrthoFinder output from all 47 species
Spa_g04777 No alias light chain of clathrin triskelion & original description: none 0.03 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
MF GO:0005198 structural molecule activity IEA Interproscan
BP GO:0006886 intracellular protein transport IEA Interproscan
BP GO:0016192 vesicle-mediated transport IEA Interproscan
CC GO:0030130 clathrin coat of trans-Golgi network vesicle IEA Interproscan
CC GO:0030132 clathrin coat of coated pit IEA Interproscan
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Type GO Term Name Evidence Source
MF GO:0003924 GTPase activity IEP HCCA
MF GO:0004857 enzyme inhibitor activity IEP HCCA
MF GO:0005516 calmodulin binding IEP HCCA
MF GO:0005525 GTP binding IEP HCCA
BP GO:0006812 monoatomic cation transport IEP HCCA
BP GO:0006813 potassium ion transport IEP HCCA
MF GO:0008324 monoatomic cation transmembrane transporter activity IEP HCCA
MF GO:0015075 monoatomic ion transmembrane transporter activity IEP HCCA
MF GO:0015079 potassium ion transmembrane transporter activity IEP HCCA
MF GO:0015318 inorganic molecular entity transmembrane transporter activity IEP HCCA
MF GO:0016787 hydrolase activity IEP HCCA
MF GO:0019001 guanyl nucleotide binding IEP HCCA
MF GO:0022890 inorganic cation transmembrane transporter activity IEP HCCA
BP GO:0030001 metal ion transport IEP HCCA
MF GO:0030234 enzyme regulator activity IEP HCCA
MF GO:0032561 guanyl ribonucleotide binding IEP HCCA
BP GO:0034220 monoatomic ion transmembrane transport IEP HCCA
MF GO:0046873 metal ion transmembrane transporter activity IEP HCCA
BP GO:0071805 potassium ion transmembrane transport IEP HCCA
BP GO:0098655 monoatomic cation transmembrane transport IEP HCCA
BP GO:0098660 inorganic ion transmembrane transport IEP HCCA
BP GO:0098662 inorganic cation transmembrane transport IEP HCCA
MF GO:0098772 molecular function regulator activity IEP HCCA
MF GO:0140678 molecular function inhibitor activity IEP HCCA
InterPro domains Description Start Stop
IPR000996 Clathrin_L-chain 150 288
No external refs found!