1. Home
  2. Species
  3. Zea mays
  4. Sequence
  5. Zm00001e033434_P003

Zm00001e033434_P003 (Zm00001e033434)


Aliases : Zm00001e033434

Description : endo-beta-1,4-xylanase


Gene families : OG0001478 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0001478_tree

Sequence : coding (download), protein (download)


Download

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Zm00001e033434_P003

Target Alias Description ECC score Gene Family Method Actions
Aspi01Gene03623.t1 ATXYN1, RXF12,... endo-beta-1,4-xylanase & original description: none 0.02 OrthoFinder output from all 47 species
Dde_g13207 ATXYN1, RXF12 endo-beta-1,4-xylanase & original description: none 0.03 OrthoFinder output from all 47 species
Ehy_g26905 ATXYN1, RXF12 endo-beta-1,4-xylanase & original description: none 0.02 OrthoFinder output from all 47 species
Lfl_g31024 ATXYN1, RXF12 endo-beta-1,4-xylanase & original description: none 0.03 OrthoFinder output from all 47 species
Smo111304 ATXYN1, RXF12 Cell wall.hemicellulose.xylan.modification and... 0.03 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
MF GO:0004553 hydrolase activity, hydrolyzing O-glycosyl compounds IEA Interproscan
BP GO:0005975 carbohydrate metabolic process IEA Interproscan
MF GO:0016798 hydrolase activity, acting on glycosyl bonds IEA Interproscan
Toggle parental
Type GO Term Name Evidence Source

No Predicted GO terms available for this sequence
InterPro domains Description Start Stop
IPR003305 CenC_carb-bd 414 547
IPR003305 CenC_carb-bd 78 216
IPR003305 CenC_carb-bd 582 723
IPR003305 CenC_carb-bd 243 381
IPR001000 GH10_dom 782 1039
No external refs found!