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  5. Zm00001e033209_P002

Zm00001e033209_P002 (Zm00001e033209)


Aliases : Zm00001e033209

Description : no hits & (original description: none)


Gene families : OG0000464 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000464_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Zm00001e033209_P002
Cluster HCCA: Cluster_101

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00057p00105740 evm_27.TU.AmTr_v1... No description available 0.02 OrthoFinder output from all 47 species
Azfi_s0009.g011868 No alias not classified & original description: CDS=983-2002 0.02 OrthoFinder output from all 47 species
Cre17.g744797 No alias No description available 0.02 OrthoFinder output from all 47 species
Dde_g10592 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Sam_g09403 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Solyc09g075500.3.1 Solyc09g075500 no hits & (original description: none) 0.03 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
BP GO:0001522 pseudouridine synthesis IEP HCCA
MF GO:0004842 ubiquitin-protein transferase activity IEP HCCA
BP GO:0006643 membrane lipid metabolic process IEP HCCA
BP GO:0006665 sphingolipid metabolic process IEP HCCA
BP GO:0006672 ceramide metabolic process IEP HCCA
BP GO:0006996 organelle organization IEP HCCA
BP GO:0009451 RNA modification IEP HCCA
MF GO:0009982 pseudouridine synthase activity IEP HCCA
BP GO:0016567 protein ubiquitination IEP HCCA
MF GO:0016810 hydrolase activity, acting on carbon-nitrogen (but not peptide) bonds IEP HCCA
MF GO:0016811 hydrolase activity, acting on carbon-nitrogen (but not peptide) bonds, in linear amides IEP HCCA
MF GO:0016866 intramolecular transferase activity IEP HCCA
MF GO:0019787 ubiquitin-like protein transferase activity IEP HCCA
MF GO:0019842 vitamin binding IEP HCCA
MF GO:0030170 pyridoxal phosphate binding IEP HCCA
BP GO:0032446 protein modification by small protein conjugation IEP HCCA
MF GO:0070279 vitamin B6 binding IEP HCCA
BP GO:0070647 protein modification by small protein conjugation or removal IEP HCCA
InterPro domains Description Start Stop
IPR008507 DUF789 121 448
No external refs found!