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  5. Zm00001e032564_P001

Zm00001e032564_P001 (BTAF1, RGD3, CHA16,...)


Aliases : BTAF1, RGD3, CHA16, ATBTAF1, CHR16, Zm00001e032564

Description : chromatin remodeling factor (Mot1). TATA box-binding protein-associated factor (MOT1)


Gene families : OG0004296 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0004296_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Zm00001e032564_P001
Cluster HCCA: Cluster_122

Target Alias Description ECC score Gene Family Method Actions
AT3G54280 BTAF1, RGD3,... DNA binding;ATP binding;nucleic acid... 0.02 OrthoFinder output from all 47 species
Aev_g04198 BTAF1, RGD3,... TATA box-binding protein-associated factor *(MOT1) &... 0.02 OrthoFinder output from all 47 species
Cba_g23640 BTAF1, RGD3,... TATA box-binding protein-associated factor *(MOT1) &... 0.02 OrthoFinder output from all 47 species
Cre16.g687301 BTAF1, RGD3,... RNA biosynthesis.RNA polymerase II-dependent... 0.02 OrthoFinder output from all 47 species
Ehy_g09279 BTAF1, RGD3,... TATA box-binding protein-associated factor *(MOT1) &... 0.03 OrthoFinder output from all 47 species
LOC_Os02g06588.1 BTAF1, RGD3,... chromatin remodeling factor (Mot1). TATA box-binding... 0.03 OrthoFinder output from all 47 species
LOC_Os02g06592.1 BTAF1, RGD3,... chromatin remodeling factor (Mot1). TATA box-binding... 0.03 OrthoFinder output from all 47 species
MA_10431148g0010 BTAF1, RGD3,... TATA-binding protein-associated factor BTAF1... 0.04 OrthoFinder output from all 47 species
MA_79681g0010 BTAF1, RGD3,... chromatin remodeling factor (Mot1). TATA box-binding... 0.02 OrthoFinder output from all 47 species
Mp6g18490.1 BTAF1, RGD3,... chromatin remodeling factor (Mot1). TATA box-binding... 0.04 OrthoFinder output from all 47 species
Sam_g29302 No alias TATA box-binding protein-associated factor *(MOT1) &... 0.03 OrthoFinder output from all 47 species
Smo186944 BTAF1, RGD3,... RNA biosynthesis.RNA polymerase II-dependent... 0.02 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
MF GO:0005515 protein binding IEA Interproscan
MF GO:0005524 ATP binding IEA Interproscan
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Type GO Term Name Evidence Source
CC GO:0000786 nucleosome IEP HCCA
MF GO:0004175 endopeptidase activity IEP HCCA
MF GO:0004197 cysteine-type endopeptidase activity IEP HCCA
MF GO:0005543 phospholipid binding IEP HCCA
BP GO:0006325 chromatin organization IEP HCCA
BP GO:0006334 nucleosome assembly IEP HCCA
BP GO:0006338 chromatin remodeling IEP HCCA
MF GO:0008234 cysteine-type peptidase activity IEP HCCA
MF GO:0008289 lipid binding IEP HCCA
BP GO:0009966 regulation of signal transduction IEP HCCA
BP GO:0010646 regulation of cell communication IEP HCCA
BP GO:0016043 cellular component organization IEP HCCA
BP GO:0016485 protein processing IEP HCCA
CC GO:0018995 host cellular component IEP HCCA
BP GO:0022607 cellular component assembly IEP HCCA
BP GO:0023051 regulation of signaling IEP HCCA
BP GO:0032012 regulation of ARF protein signal transduction IEP HCCA
CC GO:0032993 protein-DNA complex IEP HCCA
CC GO:0033643 host cell part IEP HCCA
CC GO:0033646 host intracellular part IEP HCCA
CC GO:0033647 host intracellular organelle IEP HCCA
CC GO:0033648 host intracellular membrane-bounded organelle IEP HCCA
BP GO:0034728 nucleosome organization IEP HCCA
MF GO:0035091 phosphatidylinositol binding IEP HCCA
CC GO:0042025 host cell nucleus IEP HCCA
BP GO:0043933 protein-containing complex organization IEP HCCA
CC GO:0044815 DNA packaging complex IEP HCCA
BP GO:0046578 regulation of Ras protein signal transduction IEP HCCA
BP GO:0048583 regulation of response to stimulus IEP HCCA
BP GO:0051056 regulation of small GTPase mediated signal transduction IEP HCCA
BP GO:0051604 protein maturation IEP HCCA
BP GO:0065003 protein-containing complex assembly IEP HCCA
BP GO:0065004 protein-DNA complex assembly IEP HCCA
BP GO:0071586 CAAX-box protein processing IEP HCCA
BP GO:0071824 protein-DNA complex subunit organization IEP HCCA
BP GO:1902531 regulation of intracellular signal transduction IEP HCCA
InterPro domains Description Start Stop
IPR000330 SNF2_N 1475 1767
IPR001650 Helicase_C 1826 1928
IPR022707 Mot1_central_dom 783 1238
IPR000357 HEAT 1299 1328
No external refs found!