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  5. Zm00001e032353_P002

Zm00001e032353_P002 (Zm00001e032353)


Aliases : Zm00001e032353

Description : no hits & (original description: none)


Gene families : OG0008323 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0008323_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Zm00001e032353_P002

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00006p00113000 evm_27.TU.AmTr_v1... No description available 0.03 OrthoFinder output from all 47 species
AT1G22970 No alias unknown protein; BEST Arabidopsis thaliana protein match... 0.03 OrthoFinder output from all 47 species
Azfi_s0051.g031295 No alias not classified & original description: CDS=76-1056 0.03 OrthoFinder output from all 47 species
Cba_g01839 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Ehy_g00791 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
LOC_Os05g48070.1 LOC_Os05g48070 no hits & (original description: none) 0.03 OrthoFinder output from all 47 species
Len_g09332 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species
Lfl_g12606 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Ppi_g03663 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Spa_g08051 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
BP GO:0001522 pseudouridine synthesis IEP HCCA
BP GO:0002097 tRNA wobble base modification IEP HCCA
BP GO:0002098 tRNA wobble uridine modification IEP HCCA
MF GO:0003676 nucleic acid binding IEP HCCA
MF GO:0003690 double-stranded DNA binding IEP HCCA
MF GO:0004386 helicase activity IEP HCCA
MF GO:0005488 binding IEP HCCA
BP GO:0006139 nucleobase-containing compound metabolic process IEP HCCA
BP GO:0006399 tRNA metabolic process IEP HCCA
BP GO:0006400 tRNA modification IEP HCCA
BP GO:0006511 ubiquitin-dependent protein catabolic process IEP HCCA
BP GO:0008033 tRNA processing IEP HCCA
BP GO:0009451 RNA modification IEP HCCA
BP GO:0016070 RNA metabolic process IEP HCCA
MF GO:0019899 enzyme binding IEP HCCA
BP GO:0019941 modification-dependent protein catabolic process IEP HCCA
BP GO:0022613 ribonucleoprotein complex biogenesis IEP HCCA
MF GO:0031625 ubiquitin protein ligase binding IEP HCCA
CC GO:0033588 elongator holoenzyme complex IEP HCCA
BP GO:0034470 ncRNA processing IEP HCCA
BP GO:0034641 cellular nitrogen compound metabolic process IEP HCCA
BP GO:0042254 ribosome biogenesis IEP HCCA
BP GO:0043632 modification-dependent macromolecule catabolic process IEP HCCA
BP GO:0044085 cellular component biogenesis IEP HCCA
BP GO:0044260 cellular macromolecule metabolic process IEP HCCA
MF GO:0044389 ubiquitin-like protein ligase binding IEP HCCA
BP GO:0090304 nucleic acid metabolic process IEP HCCA
CC GO:0140535 intracellular protein-containing complex IEP HCCA

No InterPro domains available for this sequence

No external refs found!