Zm00001e032123_P001 (ESP1, Zm00001e032123)


Aliases : ESP1, Zm00001e032123

Description : component ESP1 of Cleavage Stimulatory Factor (CstF) complex


Gene families : OG0001642 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0001642_tree

Sequence : coding (download), protein (download)


Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Zm00001e032123_P001

Target Alias Description ECC score Gene Family Method Actions
Adi_g079619 CSTF64 component *(ESP1) of Cleavage Stimulatory Factor (CstF)... 0.03 OrthoFinder output from all 47 species
Ala_g18279 ESP1 component *(ESP1) of Cleavage Stimulatory Factor (CstF)... 0.01 OrthoFinder output from all 47 species
Ceric.11G063300.1 ESP1, Ceric.11G063300 component *(ESP1) of Cleavage Stimulatory Factor (CstF)... 0.02 OrthoFinder output from all 47 species
Cre01.g024200 CSTF64 RNA processing.RNA 3-end polyadenylation.Cleavage... 0.02 OrthoFinder output from all 47 species
Dcu_g11366 CSTF64 component *(ESP1) of Cleavage Stimulatory Factor (CstF)... 0.02 OrthoFinder output from all 47 species
GSVIVT01008293001 ESP1 RNA processing.RNA 3-end polyadenylation.Cleavage... 0.04 OrthoFinder output from all 47 species
GSVIVT01008294001 ESP1 RNA processing.RNA 3-end polyadenylation.Cleavage... 0.03 OrthoFinder output from all 47 species
GSVIVT01013670001 CSTF64 RNA processing.RNA 3-end polyadenylation.Cleavage... 0.02 OrthoFinder output from all 47 species
LOC_Os05g43780.1 ESP1, LOC_Os05g43780 component ESP1 of Cleavage Stimulatory Factor (CstF) complex 0.12 OrthoFinder output from all 47 species
Solyc02g069160.3.1 CSTF64, Solyc02g069160 component CstF64/Rna15 of Cleavage Stimulatory Factor... 0.05 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
BP GO:0031124 mRNA 3'-end processing IEA Interproscan
Type GO Term Name Evidence Source
BP GO:0000290 deadenylation-dependent decapping of nuclear-transcribed mRNA IEP HCCA
BP GO:0000956 nuclear-transcribed mRNA catabolic process IEP HCCA
MF GO:0003723 RNA binding IEP HCCA
BP GO:0006401 RNA catabolic process IEP HCCA
BP GO:0006402 mRNA catabolic process IEP HCCA
MF GO:0008047 enzyme activator activity IEP HCCA
BP GO:0009056 catabolic process IEP HCCA
BP GO:0009057 macromolecule catabolic process IEP HCCA
BP GO:0009892 negative regulation of metabolic process IEP HCCA
BP GO:0010468 regulation of gene expression IEP HCCA
BP GO:0010605 negative regulation of macromolecule metabolic process IEP HCCA
BP GO:0010629 negative regulation of gene expression IEP HCCA
BP GO:0019222 regulation of metabolic process IEP HCCA
BP GO:0019439 aromatic compound catabolic process IEP HCCA
MF GO:0030234 enzyme regulator activity IEP HCCA
BP GO:0034655 nucleobase-containing compound catabolic process IEP HCCA
BP GO:0043085 positive regulation of catalytic activity IEP HCCA
BP GO:0044093 positive regulation of molecular function IEP HCCA
BP GO:0044248 cellular catabolic process IEP HCCA
BP GO:0044260 cellular macromolecule metabolic process IEP HCCA
BP GO:0044265 cellular macromolecule catabolic process IEP HCCA
BP GO:0044270 cellular nitrogen compound catabolic process IEP HCCA
BP GO:0046700 heterocycle catabolic process IEP HCCA
BP GO:0048519 negative regulation of biological process IEP HCCA
BP GO:0050790 regulation of catalytic activity IEP HCCA
BP GO:0060255 regulation of macromolecule metabolic process IEP HCCA
BP GO:0065009 regulation of molecular function IEP HCCA
MF GO:0098772 molecular function regulator activity IEP HCCA
BP GO:0110154 RNA decapping IEP HCCA
BP GO:0110156 methylguanosine-cap decapping IEP HCCA
MF GO:0140677 molecular function activator activity IEP HCCA
BP GO:1901361 organic cyclic compound catabolic process IEP HCCA
BP GO:1901575 organic substance catabolic process IEP HCCA
InterPro domains Description Start Stop
IPR025742 CSTF2_hinge 6 72
IPR026896 CSTF_C 339 371
No external refs found!