- Species
- Tools
- Expression Profiles
- Compare profiles
- Create heatmap
- Export expression levels
- Expression Specificity
- Compare specificities
- Find specific profiles
- Co-expression Networks
- Create custom network
- Find enriched clusters
- Search
Aliases : Zm00001e031729
Description : Patellin-5 OS=Arabidopsis thaliana (sp|q9m0r2|patl5_arath : 374.0)
Gene families : OG0000756 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000756_tree
Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.
| Type | Description | Actions |
|---|---|---|
| Neighborhood | HRR: Zm00001e031729_P005 | |
| Cluster | HCCA: Cluster_152 |
| Target | Alias | Description | ECC score | Gene Family Method | Actions |
|---|---|---|---|---|---|
| AMTR_s00023p00086020 | evm_27.TU.AmTr_v1... | Patellin-6 OS=Arabidopsis thaliana | 0.04 | OrthoFinder output from all 47 species | |
| AMTR_s00032p00036450 | evm_27.TU.AmTr_v1... | Patellin-4 OS=Arabidopsis thaliana | 0.04 | OrthoFinder output from all 47 species | |
| AT1G22530 | PATL2 | PATELLIN 2 | 0.12 | OrthoFinder output from all 47 species | |
| AT1G72160 | No alias | Sec14p-like phosphatidylinositol transfer family protein | 0.05 | OrthoFinder output from all 47 species | |
| Adi_g039396 | No alias | not classified & original description: none | 0.02 | OrthoFinder output from all 47 species | |
| Adi_g069099 | No alias | not classified & original description: none | 0.02 | OrthoFinder output from all 47 species | |
| Aev_g38820 | No alias | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Ala_g06939 | No alias | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Aob_g26093 | No alias | not classified & original description: none | 0.06 | OrthoFinder output from all 47 species | |
| Cba_g14652 | No alias | not classified & original description: none | 0.02 | OrthoFinder output from all 47 species | |
| Ceric.03G077900.1 | Ceric.03G077900 | not classified & original description: pacid=50572716... | 0.04 | OrthoFinder output from all 47 species | |
| Dcu_g09471 | No alias | not classified & original description: none | 0.05 | OrthoFinder output from all 47 species | |
| Dcu_g40895 | No alias | not classified & original description: none | 0.04 | OrthoFinder output from all 47 species | |
| GSVIVT01030264001 | No alias | Patellin-6 OS=Arabidopsis thaliana | 0.03 | OrthoFinder output from all 47 species | |
| GSVIVT01036782001 | No alias | Patellin-4 OS=Arabidopsis thaliana | 0.05 | OrthoFinder output from all 47 species | |
| Gb_20479 | No alias | Patellin-6 OS=Arabidopsis thaliana... | 0.03 | OrthoFinder output from all 47 species | |
| LOC_Os01g65380.1 | LOC_Os01g65380 | Patellin-5 OS=Arabidopsis thaliana... | 0.04 | OrthoFinder output from all 47 species | |
| LOC_Os05g35460.1 | LOC_Os05g35460 | Patellin-5 OS=Arabidopsis thaliana... | 0.07 | OrthoFinder output from all 47 species | |
| Len_g11026 | No alias | not classified & original description: none | 0.02 | OrthoFinder output from all 47 species | |
| Len_g24508 | No alias | not classified & original description: none | 0.02 | OrthoFinder output from all 47 species | |
| MA_19741g0010 | No alias | Patellin-6 OS=Arabidopsis thaliana... | 0.03 | OrthoFinder output from all 47 species | |
| Mp4g16700.1 | No alias | Patellin-6 OS=Arabidopsis thaliana... | 0.05 | OrthoFinder output from all 47 species | |
| Mp4g16720.1 | No alias | Patellin-6 OS=Arabidopsis thaliana... | 0.04 | OrthoFinder output from all 47 species | |
| Nbi_g17352 | No alias | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Nbi_g24618 | No alias | not classified & original description: none | 0.04 | OrthoFinder output from all 47 species | |
| Ore_g20603 | No alias | not classified & original description: none | 0.02 | OrthoFinder output from all 47 species | |
| Ore_g25460 | No alias | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Pnu_g13387 | No alias | not classified & original description: none | 0.02 | OrthoFinder output from all 47 species | |
| Sacu_v1.1_s0019.g007915 | No alias | not classified & original description: CDS=438-2087 | 0.03 | OrthoFinder output from all 47 species | |
| Sacu_v1.1_s0020.g008144 | No alias | not classified & original description: CDS=1-1644 | 0.03 | OrthoFinder output from all 47 species | |
| Smo90159 | No alias | Patellin-6 OS=Arabidopsis thaliana | 0.02 | OrthoFinder output from all 47 species | |
| Solyc02g070210.3.1 | Solyc02g070210 | Patellin-4 OS=Arabidopsis thaliana... | 0.03 | OrthoFinder output from all 47 species | |
| Solyc09g025230.4.1 | Solyc09g025230 | Patellin-5 OS=Arabidopsis thaliana... | 0.02 | OrthoFinder output from all 47 species |
| Type | GO Term | Name | Evidence | Source |
|---|---|---|---|---|
No GO annotation available for this sequence |
| Type | GO Term | Name | Evidence | Source |
|---|---|---|---|---|
| MF | GO:0003674 | molecular_function | IEP | HCCA |
| MF | GO:0003824 | catalytic activity | IEP | HCCA |
| MF | GO:0004553 | hydrolase activity, hydrolyzing O-glycosyl compounds | IEP | HCCA |
| MF | GO:0004601 | peroxidase activity | IEP | HCCA |
| CC | GO:0005576 | extracellular region | IEP | HCCA |
| CC | GO:0005618 | cell wall | IEP | HCCA |
| BP | GO:0005975 | carbohydrate metabolic process | IEP | HCCA |
| BP | GO:0006073 | cellular glucan metabolic process | IEP | HCCA |
| BP | GO:0006950 | response to stress | IEP | HCCA |
| BP | GO:0006979 | response to oxidative stress | IEP | HCCA |
| BP | GO:0008150 | biological_process | IEP | HCCA |
| MF | GO:0016209 | antioxidant activity | IEP | HCCA |
| MF | GO:0016409 | palmitoyltransferase activity | IEP | HCCA |
| MF | GO:0016491 | oxidoreductase activity | IEP | HCCA |
| MF | GO:0016684 | oxidoreductase activity, acting on peroxide as acceptor | IEP | HCCA |
| MF | GO:0016740 | transferase activity | IEP | HCCA |
| MF | GO:0016762 | xyloglucan:xyloglucosyl transferase activity | IEP | HCCA |
| MF | GO:0016787 | hydrolase activity | IEP | HCCA |
| MF | GO:0016798 | hydrolase activity, acting on glycosyl bonds | IEP | HCCA |
| MF | GO:0020037 | heme binding | IEP | HCCA |
| CC | GO:0030312 | external encapsulating structure | IEP | HCCA |
| BP | GO:0044042 | glucan metabolic process | IEP | HCCA |
| BP | GO:0044264 | cellular polysaccharide metabolic process | IEP | HCCA |
| MF | GO:0046906 | tetrapyrrole binding | IEP | HCCA |
| CC | GO:0048046 | apoplast | IEP | HCCA |
| BP | GO:0050896 | response to stimulus | IEP | HCCA |
| BP | GO:0055114 | obsolete oxidation-reduction process | IEP | HCCA |
| MF | GO:0097159 | organic cyclic compound binding | IEP | HCCA |
| MF | GO:1901363 | heterocyclic compound binding | IEP | HCCA |
| No external refs found! |